Gene Ping_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1544 
Symbol 
ID4626210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1893078 
End bp1894088 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content35% 
IMG OID639796741 
Productpeptidase M23B 
Protein accessionYP_942951 
Protein GI119945271 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.216338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.486624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATA AATCAATTAT TACCATCTCT ACCATTAATG GTACAAGAGG GTTTCATCTA 
GCCCCATGGC ACTTTAAAAC ATTTAAAATA GTCTCTGCAT TAATTGTATT TTTTTTCCTA
GCTCTCACCA TAAATTTATT TGAGCTCTCT GATAAAATGG ACCAAGTGAC TCTTTCTGAG
AACCAATTAA TAAGCCAAGC AAATAAATTA CAACACCAAT TAATAAGCCA AGAAAATACA
TTGCAAGGTA CCATTACTGA TTTAAGTGAT GAAAAGCTAG AACTTAAACA AGACATAAAT
CAACGTGATT CTATGTTAGA TAAGTTTTAC ACACGATTAA ATAATCTAGA AAATTACTTA
GAAGGTGATT CTTCGCTTAA TGATACAAAA CAAAACTTAG GTGCCAGCGA AAGTATTGAT
AGTCGTTTAA ATGCAGCAAC CATAAACTCA GCACTCAGAA TCAACTTTCT ACGCAATGTA
CCTAATGGAT CACCAGTAAA AAAAGCTCGA TTATCATCAC AATTTGGATA CCGCACTCAC
CCTGTGACCA AGAAACGGAA AAAGCACAGA GGTTTGGATT TTGCAGTTAA TACTGGAACG
CCTATCTATG CCACTGCAGA TGGTGTTGTT GAAATGGCAA GGAAAAGTAA TTTAGGCTCT
GGAAATTTTT TACGTATTCA GCATAGCCAT GGTTTCAGTA GTTCTTTTTC TCACATGAAA
TCTTTCAAAG CACACAGTGG TCAGTTTGTT GAAAAAGGGC AATTAATTGG ATATTCTGGC
AATACTGGTA TGTCTTCAGG TCCGCACTTG CATTATGAAA TTCGTTTTGT AGGACGAGCC
TTAGATCCAC TCAATTTCGT GAGATGGAAT AATGATAACT TCGATACAAT ATATGAAAAA
GAAAAGGGAA TAAAATGGGA TTATTTAGTT CAAAAACAGG AACAACAGAT CAACATTCAA
CTGCAACTGT TATCGCAACT GGATGCAGCA TTACTGGTAC AGTCCAATTA G
 
Protein sequence
MKDKSIITIS TINGTRGFHL APWHFKTFKI VSALIVFFFL ALTINLFELS DKMDQVTLSE 
NQLISQANKL QHQLISQENT LQGTITDLSD EKLELKQDIN QRDSMLDKFY TRLNNLENYL
EGDSSLNDTK QNLGASESID SRLNAATINS ALRINFLRNV PNGSPVKKAR LSSQFGYRTH
PVTKKRKKHR GLDFAVNTGT PIYATADGVV EMARKSNLGS GNFLRIQHSH GFSSSFSHMK
SFKAHSGQFV EKGQLIGYSG NTGMSSGPHL HYEIRFVGRA LDPLNFVRWN NDNFDTIYEK
EKGIKWDYLV QKQEQQINIQ LQLLSQLDAA LLVQSN