Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1543 |
Symbol | |
ID | 4626209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 1888116 |
End bp | 1891946 |
Gene Length | 3831 bp |
Protein Length | 1276 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639796740 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_942950 |
Protein GI | 119945270 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.386484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.38403 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTTTA ATAATTCAAA CATCACAGCG TCCCCTATTC GTCAAAAAAT TCGCGAGTTC TATCGTATTG ATGAAAGTAT TGCGGTAGAG CATATTTTAC CCTTGGCAGA AGTTAACGAT AATGCAGCAA GCAGAGCGTG GGAAAAAGCC CGTAAAATGT CTATGAAAAT ACGTAAAGAT GAATCGGGAA ACGGTGCGGT AGATGCCTTA CTGGCAGAAT ACACATTATC AAGTGAAGAA GGTGTGGTGT TGATGTGTTT AGCCGAAGCC TTATTACGTG TGCCAGATAA GCATACCCAA GATGCCCTCA TTAGTGACAA AATATCTAAA GGGCAGTGGG ACAGTCATCT AGGCAGCAGT GATTCACTGT TCGTTAATGC CTCATCTTGG GGGTTATTAG TGACCGGAAA GATGGTTGAC TATGCTGATG AACGCGAAAA AGATAGCTTT GATTTATTGA AGAAGGTTAT TGGTCGATTA GGTGAGCCTG TCATTCGCAA GTCAATGAAC TACGCCATGC AAATTATGGG TGAGCAGTTT GTTATGGGCG AAACTATTCA AGATGCTACT GATCATGCTG CCAAGAAAGC GCGGCAAGGC TTCGTCTATT CTTACGACAT GCTAGGTGAA GGTGCGCGAA CCATGAGTGA CGCTGAAAAG TATTTTAAAG CTTATCAAGT TGCTATAGAT GCTATTGGCG CAGTTGCTCG TGCGTCGGGT AAGAACGACC CTCGCAAAGT GCCTGGTATT TCAGTTAAGC TTACTGCGAT TCATCCTCGT TACGAATTTG CACAAAAAGA ACGGGTAATG GCTGAAGTTG CTCCCAAACT TAAAGCACTT TGTTTGCAAG CCAAAAGCTA CAATATTGGT TTAACTGTTG ATGCGGAAGA GTCTGAGCGA TTAGATATCT CCCTTGATGT TATTGAGGCG GTATTTAGTG ATGATGAGTT AGCAGGTTGG AATGGCTTTT CGATGGCCCT GCAAGCTTAT CAAAAACGCG CTATTTTTAT AGTTGACTGG TTACGTGAAC TAACCATCCG TGTTGACCGA AAAATGATGG TGCGCTTGGT AAAAGGTGCT TATTGGGATA CTCAGATTAA AAACAGCCAA AAAGGGGGTT ATCAGCATTT TCCGCTATTC ACTCGCAAGG CTTCGACTGA TGTATCTTAC ATCGCCTGTG CGAAAAAATT ATTAGAATAT AGAGATACCA TCTTTCCACA GTTTGCTACG CATAATGCTT ACACTGTCGC GACTATTCTT GAGCTGGCGG GCAATGACAA AACAAGTTTT GAATTCCAAT GTCTATATGG CATGGGTGGC TCGTTATATG ATCAAGTTGT TACAAATGAA AATGTTCAAT GTCGCATCTA CGCACCGGTT GGTCCTCATG AAGATCTACT CGCCTATTTA GTTCGTCGTT TGTTAGAAAA TGGCGCTAAC TCTTCTTTTG TTAACGCCAT TATTGATGAC TCACAACCGA TCGAATCTTT GCTTCGCAAT CCCGTTGAAA AAATGCATAG CTTAAAAGAC AAATATAACG GCCAGATAAT CAAACCCATC GCGTTATACC ATGATCAAAA AGGTGTCGGT CGAGATAATT CCAAGGGCCT AGATTTAACA GATATCAATA CAGTAACCCC TTTAAAAACA TCACTGGATA ACTGGCTTGT GAATAACTTG TTCTCTGAAG ATGATGTGCC AGAAGGTTCT ATCGCTATTA GAAACCCAGC AAAGCAGAGT GAAATTATTG GTTTTCAACG ACATCACAGC AAGGATGAAA TGCTCGCGAT GGTCGAAACA GCTCACAATG CATTTGCTTC ATGGTCACAA ACGTCTGTAT CTGAACGTGC GGACTTATTA TGCCGTGTTG CCGATGTTCT TGAACATCAT ATGGATGAGT TTATTGCCTT ATGCATTAAG GAAGCAGGGA AAACGACACA AGATGGTATT GATGAAGTCA AAGAGGCAGT TGATTTTTGT CGCTATTATG CACAACAAGC GATTGAACTT GCAGAAGATG ATCGTATAGA AGCCCGTGGT GTGGTGTTAT GTATCAGCCC CTGGAACTTC CCGTTAGCTA TATTTGTAGG GCAAGTGACT GCTGCCATTG CTACTGGTAA TACAGTGTTA GCTAAACCAG CCCAGCAAAC AAGTTTAATT GCATTGCGCG CTATTGAACT AATGACATCG GTTGGATTAC CCCATGGCGT TGTACAAGCC GTTATTGCAA AGGGTAGTGA TGTGGGTAAA GTTATTATTC CTAATGCACG TATTCAAGCG GTTATTTTTA CTGGTTCTAT TAAAACAGCG ACTATAATTT CGCAAACATT GGCTGATAGA GGTGGCGATC AAGTGCCGTT TATTGCTGAG ACGGGTGGTC AAAACTGTAT GTTAGTTGAC TCTACCGCCC TACCTGAACA AGTCGTTGAT GATGTTATTT CTTCAGGATT TCAATCTGCA GGTCAACGTT GTTCTGCACT TCGAGTGTTA TTTTTACAAG AAGATATTGC TGATAATGTT ATTACAATGC TTAAAGGCGC ATTAGCAGAA TTGCATGTGG GTAACCCAGA AAAACTGAGT ACTGACGTAG GTCCTGTTAT TGATCAAAAA GCGCTAGATT CACTCAATGC TCACAGTGAC TATATGAAAA CCCATGGTCA ACTATTATAT CAATGCGATA TTTCTGATGA GATAACAAAT GAAATAGCAG ATAACGAACA TTTCTTTTTT GCGCCACGAC TTTATGAAAT AGAGAATATT AGCGCGCTGA AGGAGGAAGT ATTTGGCCCT TGTGTTCATA TTGTTCGCTT TAAAGGCGAT GAAATAGAAA AAGTCGTTGA TGATATTAAC GACACAGGTT TTGGCTTAAC GATGGGTATC CATACCCGTA TTGAACAGCG AGCCTTAAAG TTGGCGAAGC TATCACGAGC AGGTAATGTG TATATAAATC GCAATATAAT TGGCGCTATT GTGGGTGTGC AACCTTTTGG TGGTCGTGGT CTTTCAGGTA CAGGGCCAAA AGCAGGTGGC CCATATTATT TAACGCGTTT AGTTAAAGAA ATAACAACGC CCGCTGCCAA GAAACTTAAT TTAATACCAC AGCAAGCAGA AGCATCAAAC AGCGATACGG ATGCGCAAGC AGTATTATTT ATGGACAAAG CGAGGACAGC AGAAAAAATC TGGCGCTTGA CCGAGTTAAA TACCCGTATA TCTTGTGTTA GCGAAGTGTT AGCAAAAATA GCTCATATCG ATATCATTAC TAATTTAGCA GACGATTTAA CTAATACTTT AAAAGCGGCG CGCTCACAAT TAATTGATAT TGAAAAACAC TTGAAAGAAC CAACCGTTTT ACCAGGTCCA ACAGGTGAGT CTAATATTCT ATATTTAGAA AATCGTGGCA ACATAATCTG TTTTGCTGAC GAGAATGTTA GTTTTCACTT TTGGTTGCTT TCTGTCGTAA CGGCTTTGGC AACGGGTAAT ACCGTGATCT CCGTTGTCTC TGACTTGTTT TATGATCAAG CAATCGCTTT TAGAGATGAA CTTATTGCAA CAGGGGAAGA TGAGAATATT TTTCAAATTG CCCGGTTATG CCATTTAACA ACGTTGCTGG CACAGCCTGG ATTATCAGGT GTTGTTGTTG ATAGTCATTG CGACCGTGAA CATTATATCA GTGAGAAATT AGCAGAACGT CAAGGTGCAA TTTTACCGGT GATCAGTTCA AAATATGTTG ATAATTTAAT GCAGCGATTA TTAACAGAAA AAGCTGTCAG TATTAATACC ACCGCGACCG GTGGTAATAC GTCACTCATG ACCTTAGATG AAGAAGATTA A
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Protein sequence | MLFNNSNITA SPIRQKIREF YRIDESIAVE HILPLAEVND NAASRAWEKA RKMSMKIRKD ESGNGAVDAL LAEYTLSSEE GVVLMCLAEA LLRVPDKHTQ DALISDKISK GQWDSHLGSS DSLFVNASSW GLLVTGKMVD YADEREKDSF DLLKKVIGRL GEPVIRKSMN YAMQIMGEQF VMGETIQDAT DHAAKKARQG FVYSYDMLGE GARTMSDAEK YFKAYQVAID AIGAVARASG KNDPRKVPGI SVKLTAIHPR YEFAQKERVM AEVAPKLKAL CLQAKSYNIG LTVDAEESER LDISLDVIEA VFSDDELAGW NGFSMALQAY QKRAIFIVDW LRELTIRVDR KMMVRLVKGA YWDTQIKNSQ KGGYQHFPLF TRKASTDVSY IACAKKLLEY RDTIFPQFAT HNAYTVATIL ELAGNDKTSF EFQCLYGMGG SLYDQVVTNE NVQCRIYAPV GPHEDLLAYL VRRLLENGAN SSFVNAIIDD SQPIESLLRN PVEKMHSLKD KYNGQIIKPI ALYHDQKGVG RDNSKGLDLT DINTVTPLKT SLDNWLVNNL FSEDDVPEGS IAIRNPAKQS EIIGFQRHHS KDEMLAMVET AHNAFASWSQ TSVSERADLL CRVADVLEHH MDEFIALCIK EAGKTTQDGI DEVKEAVDFC RYYAQQAIEL AEDDRIEARG VVLCISPWNF PLAIFVGQVT AAIATGNTVL AKPAQQTSLI ALRAIELMTS VGLPHGVVQA VIAKGSDVGK VIIPNARIQA VIFTGSIKTA TIISQTLADR GGDQVPFIAE TGGQNCMLVD STALPEQVVD DVISSGFQSA GQRCSALRVL FLQEDIADNV ITMLKGALAE LHVGNPEKLS TDVGPVIDQK ALDSLNAHSD YMKTHGQLLY QCDISDEITN EIADNEHFFF APRLYEIENI SALKEEVFGP CVHIVRFKGD EIEKVVDDIN DTGFGLTMGI HTRIEQRALK LAKLSRAGNV YINRNIIGAI VGVQPFGGRG LSGTGPKAGG PYYLTRLVKE ITTPAAKKLN LIPQQAEASN SDTDAQAVLF MDKARTAEKI WRLTELNTRI SCVSEVLAKI AHIDIITNLA DDLTNTLKAA RSQLIDIEKH LKEPTVLPGP TGESNILYLE NRGNIICFAD ENVSFHFWLL SVVTALATGN TVISVVSDLF YDQAIAFRDE LIATGEDENI FQIARLCHLT TLLAQPGLSG VVVDSHCDRE HYISEKLAER QGAILPVISS KYVDNLMQRL LTEKAVSINT TATGGNTSLM TLDEED
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