| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1516 |
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| Symbol | |
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| ID | 4626537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 1860979 |
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| End bp | 1861650 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639796717 |
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| Product | ABC polar amino acid transporter inner membrane protein |
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| Protein accession | YP_942927 |
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| Protein GI | 119945247 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0219421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.124176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAATT ATGAATTTCA TTGGAATGTT GTATTTGATG CATTCCCGCA ACTTTTAAGT
GGGGCGTTTA CAACGATACA TGTATCTGTT TTATCTATGC TTCTCGGCAT AGTTATTGCG
GTATTATTAG CTTTAGGGAA AATGTCAGAT TCAAAAGTTT TTTATAATAT GGCAAATATT
TGGATAGAGA CAGCAAGAAA TTTACCAGCA CTTTTTCTTA TCTACATGGC GTACTTTGGC
CTAGGTGCTT ATGGTATCCA TCTTAGTCCT TATTTTTCGG TTTTTTCTGC ATTAGTATTT
ATAAATGCAG GATACTTGGC AGAAACATTT AGGGGTGGTT TTCAGTCAAT CCCAACGACT
CAATATAGTG CGGCAAAATC GCTCGGAATG AACAGCTTAA AAGTTTATCG ACATGTGATA
TTGCCACAAA TGTTTAGAAG GATTTATCAT CCAATGACAA ATCAATTTGT TTGGTCAATA
TTAATGAGCT CTCTTGGTAT ACTTGTGGGT ATGAATGAGC TCTCAGGTGA GACGCAGAGA
CTTCAATCGA CTTCATTTAG AACATTAGAG TTTTTTATAG TCGCAGCTGC GATGTACTTT
GTAATAACAA AATTGGTGCT GTTAGCATCA GGCTTGATTG CAAAAAAAGT GTTTAAAGGG
GAGCTTTCAT AA
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| Protein sequence | MDNYEFHWNV VFDAFPQLLS GAFTTIHVSV LSMLLGIVIA VLLALGKMSD SKVFYNMANI
WIETARNLPA LFLIYMAYFG LGAYGIHLSP YFSVFSALVF INAGYLAETF RGGFQSIPTT
QYSAAKSLGM NSLKVYRHVI LPQMFRRIYH PMTNQFVWSI LMSSLGILVG MNELSGETQR
LQSTSFRTLE FFIVAAAMYF VITKLVLLAS GLIAKKVFKG ELS
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