Gene Ping_1514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1514 
Symbol 
ID4626535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1859610 
End bp1860332 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content37% 
IMG OID639796715 
ProductABC transporter ATP-binding protein 
Protein accessionYP_942925 
Protein GI119945245 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0101758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.119322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGAAA TCAAAGGCGT GCATAAATCT TTCGGAGATT TGGAAGTTTT AAAAGGGATC 
GATTTAAACG TAAACAGCGG TGAAGTTGTT AGTATCATTG GTGCAAGCGG TAGTGGAAAA
TCCACACTTT TGTATTGTAT TAATGCCATT GAGAAGATAA ACAGTGGCAA TATTATCGTT
GATGACATAG ATGTTCATGA TAAAAAAACA GATAAAAACA AGTTAAGACA GAATTTAGGA
ATGGTATTTC AGCAGTGGAA TTCTTTTCCT CATTTAACTG TATTAGAAAA TGCCGCGCTT
GCTCCACGAA TTGTAAAAGG GTTTACTAAA GAAGAAGCAG AAGAAATTGC TAGAAACGAA
CTAATTCATG TTGGTCTTGG TGATAAACTT GATGTGTATC CTACCAGAAT GTCCGGAGGA
CAACAGCAAC GACTCGCTAT TGCCAGAGCA TTAGCAATGA AACCTGCTTA TATGTTATTT
GATGAGGTGA CCTCAGCACT TGACCCAGAA CTCGTTGGTG AAGTGTTGGA TACTTTAAGA
TTGCTTCGGG ATGATGGTAT GACTATGATT TGTGTTACTC ATGAGATATC TTTTGCTAAA
GAAGTCTCTG ATAAAGTTGC ATTTTTCCAT AAAGGATTAA TTGAAGAGAT GGGACCACCT
GATGAGGTTT TGGGTAATCC TCAGAGAGAA AGAACACAAC AATTTTTAAG TAAAGTTCTC
TGA
 
Protein sequence
MIEIKGVHKS FGDLEVLKGI DLNVNSGEVV SIIGASGSGK STLLYCINAI EKINSGNIIV 
DDIDVHDKKT DKNKLRQNLG MVFQQWNSFP HLTVLENAAL APRIVKGFTK EEAEEIARNE
LIHVGLGDKL DVYPTRMSGG QQQRLAIARA LAMKPAYMLF DEVTSALDPE LVGEVLDTLR
LLRDDGMTMI CVTHEISFAK EVSDKVAFFH KGLIEEMGPP DEVLGNPQRE RTQQFLSKVL