Gene Ping_1507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1507 
Symbol 
ID4626563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1853802 
End bp1854596 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content45% 
IMG OID639796709 
ProductFeS assembly ATPase SufC 
Protein accessionYP_942919 
Protein GI119945239 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.274467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.26759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATA TAAATAATTT ACACGCAGAA ATCCAAGGCA ATATGATTCT AAAAGGGTTA 
AATCTGTCCG TCAAAAGCGG GGAAGTTCAC GCCATTATGG GGCCTAATGG TTCAGGGAAA
AGTACCCTTG CTAATGTTCT GGCTGGCCAT CCAGACTATC AAGTGACAAC CGGCGAAGTT
ATCTTTCAAG GGCGTGATTT ATTGACCCTT TCCGTTGCGG AGCGCGCCTG TGCAGGTGTC
TTTGTCGCTT TTCAATATCC GCTGGAAATT CCGGGTGTCA GTAACGTGCA ATTTCTTAAA
CTGGCACTTA ACAGTCAACG TAAATATCGT CAGCTCAGTG AGCTTGATGC TCTTGATTTT
TTACAACTGG TTAAAACCAA GGTACAGCAA GTGGGCATGG AAGAGCCACT TTTATACCGT
TCGATCAATG AAGGGTTTTC TGGTGGCGAG AAAAAACGCA ATGAAATCCT GCAGATGTTA
GTACTGGAAC CGCAACTGGC GATCCTTGAT GAAACCGATT CCGGTCTGGA TATCGATGCA
CTAAAACTGG TGGCACAGGG TATTAATGCC TTTCGCAATA GTGCAGATTC CGGGCAGAAG
CCAGGTATTA TTCTGGTCAC TCATTACCAA CGCCTGCTCA ACTTTATCAA TCCGGATTTT
GTCCATATTC TGTTTGATGG GCGCATTGTC AAATCTGGCG GCCCCGAACT GGCCCTGGAA
TTGGAGAGAA AGGGTTATGC CGATTTATTG CCTAAGGCAC CTTCCACAGA AAAAAATGCT
TCTAAACAGC CTTAA
 
Protein sequence
MLNINNLHAE IQGNMILKGL NLSVKSGEVH AIMGPNGSGK STLANVLAGH PDYQVTTGEV 
IFQGRDLLTL SVAERACAGV FVAFQYPLEI PGVSNVQFLK LALNSQRKYR QLSELDALDF
LQLVKTKVQQ VGMEEPLLYR SINEGFSGGE KKRNEILQML VLEPQLAILD ETDSGLDIDA
LKLVAQGINA FRNSADSGQK PGIILVTHYQ RLLNFINPDF VHILFDGRIV KSGGPELALE
LERKGYADLL PKAPSTEKNA SKQP