Gene Ping_1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1504 
Symbol 
ID4626560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1850588 
End bp1851049 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content46% 
IMG OID639796706 
ProductSUF system FeS assembly protein, NifU family protein 
Protein accessionYP_942916 
Protein GI119945236 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01994] SUF system FeS assembly protein, NifU family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.175472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATG AACTACGCGC ATTGTATCAG GAAGTGATCA TTGACCATGG CCGCCGTCCG 
AGAAATTCCA AAAAGCTTGA GCATCCGAGT TGCACTCAAG AAGGATACAA CCCGCTCTGT
GGTGACCGTT TGACACTTTA TTTGCGAATT GATGATAATA GAATTATTGA TGCCAGTTTT
GAGGGAGAAG GCTGTGCTAT CTCGATGGCG GCATCTTCAT TGATGACAGA AAGAATCAAA
AATATGACAG TGACAGAAGC ACGGCAACTG TTTACCGCTT TTCAGAACTT AGTCACGCAA
GCTGAGCCGC CTGACAATAT CCGTGAGTAC TTAGGCAAGC TCTCGGTATT AGGTGGGGTG
AGAGATTTCC CCGTCCGCAT AAAGTGCGCA ACCCTGCCCT GGCACGCACT TAATGCCTGC
TTAAATAATA TCAACACTAA GCAGATCGTT TCGACGGAGT GA
 
Protein sequence
MNDELRALYQ EVIIDHGRRP RNSKKLEHPS CTQEGYNPLC GDRLTLYLRI DDNRIIDASF 
EGEGCAISMA ASSLMTERIK NMTVTEARQL FTAFQNLVTQ AEPPDNIREY LGKLSVLGGV
RDFPVRIKCA TLPWHALNAC LNNINTKQIV STE