Gene Ping_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1493 
Symbol 
ID4626549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1840552 
End bp1841160 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content40% 
IMG OID639796697 
ProductDNA-binding transcriptional repressor FabR 
Protein accessionYP_942907 
Protein GI119945227 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.132494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0684627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCA TTAGAGCACA GCAAAAAGAA AAAACCCGCC GTCTGTTAAT TGATGCAGCT 
TTCGCTCAAT TAAGTGCTGA ACGCAGTTTT TCAAATTTAA GTTTACGAGA AGTGACTAAA
GCGGCAGGAC TCTCACCAAA CTCATTTTAT CGTCATTTTT CAGATATGGA AGAGCTTGGT
TTGATCTTGA TTAACGAAGT AGGCTTAGTG CTTAAGCAAC TAAGGTCTCA AGCCAGACTG
CGCATTAAAA AAGGCGGTTC AGCCGTAAAA ATATCCGTGT TGACTTTTAT GGAGTTCATT
GAACAATACG CTAATATTTT TCGCTTGTTA TTACAGGAAA GAGCCGGTGC CTCAACAGCA
TTTAGAACTG CACTGAGCCG TGAAATAGAT TCTTTTACTA TGGTACTTTG CGGTTATTTA
CAGCAAGCTA ACAAGTTAAA TGCCGAGTCG GCTTATCTGC AAGCCAACGC AACGATCATC
ATTGTTTTTA GTGCGGGTGC AGAGGCCTTA GATGTTGACC AAAAAAGACG GGATGATTTA
ACTAAACGTA CTATTTTACA GTTACAAATG ATTGACAAAG GATCATTAGA GATGAACTTA
TCCCGGTAG
 
Protein sequence
MSSIRAQQKE KTRRLLIDAA FAQLSAERSF SNLSLREVTK AAGLSPNSFY RHFSDMEELG 
LILINEVGLV LKQLRSQARL RIKKGGSAVK ISVLTFMEFI EQYANIFRLL LQERAGASTA
FRTALSREID SFTMVLCGYL QQANKLNAES AYLQANATII IVFSAGAEAL DVDQKRRDDL
TKRTILQLQM IDKGSLEMNL SR