Gene Ping_1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1489 
Symbol 
ID4625829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand+ 
Start bp1837207 
End bp1837845 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content38% 
IMG OID639796693 
Producturidine kinase 
Protein accessionYP_942903 
Protein GI119945223 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0501777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.122094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATTCAA AAAATTGTGT TGTTATTGCA ATCGCAGGCG CTTCTGCATC GGGCAAAAGT 
TTAATCGCAA ATACTATATA TCAAGAGTTA TGTGAAGAAT TAGGGACCAA TCAAATAGGG 
ATGATTTCCG AGGATTCTTA TTATCGGGAT CAAAGCCATC TTGAATTAGA ACTGCGTAAG 
TTGACTAATT ATGATCATCC GAAGGCATTT GAGCATGAGT TGTTGTGCTC TCATCTTAAA 
ATGCTAAAAG AGAACTGTTC CGTTAATATC CCTGTTTACA GTTATACCGA GCACACCCGT 
ACGCTAGAAT CAGAGACAAT GACCTCCAAA AAAGTGATTA TTTTAGAAGG TATATTATTA 
CTCAACGATT CAGCTTTACG GGAGCAGATA GATGTCAGTA TTTTTATTGA TACACCCCTC 
GATATCTGTC TTATGCGCCG TTTGGTTCGT GATATGGCCG AGCGAGAAAG AACGATGGAC 
TCGGTTTTAT TACAATATAC AAAAACAGTC CGTCCGATGT TTTTACAGTT TATTGAACCC 
TCTAAACAGC ATGCTGATAT TATTGTGCCA CGTGGAGGCA AAAACCGGAT TGCGAAGGAT 
CTTCTCAAAA CAAGAATAAA GTACCTATTG GGCAAATAA
 
Protein sequence
MDSKNCVVIA IAGASASGKS LIANTIYQEL CEELGTNQIG MISEDSYYRD QSHLELELRK 
LTNYDHPKAF EHELLCSHLK MLKENCSVNI PVYSYTEHTR TLESETMTSK KVIILEGILL 
LNDSALREQI DVSIFIDTPL DICLMRRLVR DMAERERTMD SVLLQYTKTV RPMFLQFIEP 
SKQHADIIVP RGGKNRIAKD LLKTRIKYLL GK