Gene Ping_1483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1483 
Symbol 
ID4625823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1832244 
End bp1832645 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content42% 
IMG OID639796688 
Productthioesterase superfamily protein 
Protein accessionYP_942898 
Protein GI119945218 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.37599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA CTTATCATCA TCCGGTGCAG ATTTATTACG AAGATACTGA CCATTCGGGG 
GTGGTGTATC ACCCTAATTT TCTGAAGTAT TTTGAACGGG CCCGTGAGCA TGTGATTGAT
AGCAATCGGC TGGATAAATT ATGGCGTGAG AATGGGCTTG GTTTTGCAGT CTATAAAGCC
AACATGACCT TTCAAGACGG GGTTGAATTT GCTGAAATTT GCGATATTCG CACAACCTAC
CAAATTGATG GCAAGTATAA AACCTTATGG AGACAAGAGG TGTGGCGACC TGGCGCGACT
AAAGCGGCTG TTATTGGTGA TATTGAAATG GTTTGTTTGG ATAAGAACAA ACGTTTACAA
CCCCTACCAG AAAGTATTTT AAAGACGCTG CTTGGTGAAT AA
 
Protein sequence
MNKTYHHPVQ IYYEDTDHSG VVYHPNFLKY FERAREHVID SNRLDKLWRE NGLGFAVYKA 
NMTFQDGVEF AEICDIRTTY QIDGKYKTLW RQEVWRPGAT KAAVIGDIEM VCLDKNKRLQ
PLPESILKTL LGE