Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1478 |
Symbol | |
ID | 4625818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1827445 |
End bp | 1828494 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639796684 |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_942894 |
Protein GI | 119945214 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.296498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAATA CCGATGATAT ACATATTAAG GCGATAAAAG AGCTATTACC ACCTATTGCA TTATTAGAAA AATTTCCGAG AACAGCCGCA ATCAGCGCAA CCGTTAGCAA TTCACGCGCA GCTATTCATA ATATTTTAAC TGATCAGGAT GATCGTGTTT TAGTAATTAT TGGTCCATGT TCAATTCATG ATACCAAAGC TGCCCTTGAG TACGCACATA AATTGGCACC GTTGCGTGAA AAATATAAAG GTTCATTAGA AATTGTGATG CGTGTTTATT TTGAGAAACC ACGTACTACG GTCGGTTGGA AAGGGCTGAT TAATGATCCG GAATTAAAGG GCACCTTTAA TATCAATAAA GGATTACGTA CAGCACGTAA ATTATTATTA GATATTAACC AGATGGGGCT ACCGGCTGCC ACTGAATTTT TAGATATGAT AACCCCGCAA TATGTTGCAG ATTTAATGAC TTGGGGCGCA ATTGGTGCGC GTACCACTGA ATCACAGGTT CACCGTGAAT TAGCATCAGG CCTCTCATGC CCGGTTGGAT TCAAGAATGG CACCGACGGT ACTATAAAAG TAGCCGTTGA CGCTATCGGT GCGGCTAATG CTTCTCATCA CTTTCTGTCG GTCAATAAAT TTGGTCACAG TGCTATTGTT GAAACCAAAG GTAATCCCGA TTGCCATATT ATTTTACGTG GTGGTAAAAC ACCAAATTAT AGTGCCCAGG ATGTTGCTGT AGTTAAAGAA AATCTGCAAA AATCAGGTTT AGCACAAAAA ATAATGATTG ATTTTAGCCA TGGAAATTCA GAGAAAAAAT TCGAAAATCA ACTGAAAGTT TGCACTAATG TGAGTGAACA AATTGCCGCT GGTGATAAAG CGATTTCTGG TGTTATGGTT GAAAGTCATC TTGTAGAAGG TCGTCAAGAC TTAATCGAGG GTGTCTGTGA AACCTACGGT CAAAGTATTA CCGATGCTTG TATCGGTTGG GCGGATACAG AGAAATTATT AGCTCAGCTT GCCGAGGCAG TTATTACCCG TCGTGGTTAA
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Protein sequence | MINTDDIHIK AIKELLPPIA LLEKFPRTAA ISATVSNSRA AIHNILTDQD DRVLVIIGPC SIHDTKAALE YAHKLAPLRE KYKGSLEIVM RVYFEKPRTT VGWKGLINDP ELKGTFNINK GLRTARKLLL DINQMGLPAA TEFLDMITPQ YVADLMTWGA IGARTTESQV HRELASGLSC PVGFKNGTDG TIKVAVDAIG AANASHHFLS VNKFGHSAIV ETKGNPDCHI ILRGGKTPNY SAQDVAVVKE NLQKSGLAQK IMIDFSHGNS EKKFENQLKV CTNVSEQIAA GDKAISGVMV ESHLVEGRQD LIEGVCETYG QSITDACIGW ADTEKLLAQL AEAVITRRG
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