Gene Ping_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1476 
SymbolmerR 
ID4625816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1825108 
End bp1826049 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content42% 
IMG OID639796682 
Producttranscriptional regulator MetR, substrate-binding, LysR family protein 
Protein accessionYP_942892 
Protein GI119945212 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.669398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGAAA TCAAACACTT AAAAACCCTG ACAACATTAA ACGCGACAGG CAGTTTAATT 
GACACTGCCC GTCAATTGCA CCTGACTCAA TCGGCAATAT CACATCAGCT AAAAGAGTTA
GAAGGGCGGC TTAATTGCGC TTTATTTATC CGTAAATCCA GACCGATTCG TTTTACGGTT
TCCGGTTTGC GTTTATTAGA TTTAGCCGAG CAGGTCTTAC CGCAAATTAA TAATGCCGAA
AGAGATGTTG CGCGTTTTTG TTCAGGGAAT GCCGGTCGTT TACATATGGC TATTGAGTGC
CACTCCTGTT TTCAGTGGTT GATGCCGGCG ATTGATAAAT TTCGTGATAG TTGGCCAGAG
GTGGAGTTAG ATTTTTGCAG TGGTTTTAGT TTTTTACCTT TACCCGCCTT AAAACGGGGA
AATTTAGATC TTGTTGTGAC CTCGGATCCG CAACCGATTG AAGGAATTAG TTACATTCCT
CTGTTTCGTT ATCAGCCGAT GCTGGCCTTA AGTCGCCATC ATAGATTGGC GCATAAAAAT
TATATTGAAG CTGAGGATCT GAGTCAGGAA ACTTTAATCA CTTACCCCGT CGAGAAAGAA
CGTTTAGATA TTTTTAACCT GTTTTTAACC CCTGAGGGGG TATCACCTGC AAAAATTCGT
CATGCTGATC TGACCCTGAT GATGTTGCAG TTAGTTGCCA GCGGCAGAGG CGTGGCGGGA
TTACCTAACT GGGCTTTATT TGAATATCTG CAAAAAGATT ATGTGGTTGC GCGGCGTTTA
GGTAAAGAAG GAATATGGAA TACCTTGTAT GCCGCAGTGC GCGAAGAGCA ACAGGGTATG
GCCTATTTAC AGGATTTTAT TAAAACGGCA ATAACCTGTT GTTTTAAAGA TCTAAAAGGG
ATCAAAGTTG CGGATTGTGA GCAGCCCTCA TTTACAAAAT AA
 
Protein sequence
MIEIKHLKTL TTLNATGSLI DTARQLHLTQ SAISHQLKEL EGRLNCALFI RKSRPIRFTV 
SGLRLLDLAE QVLPQINNAE RDVARFCSGN AGRLHMAIEC HSCFQWLMPA IDKFRDSWPE
VELDFCSGFS FLPLPALKRG NLDLVVTSDP QPIEGISYIP LFRYQPMLAL SRHHRLAHKN
YIEAEDLSQE TLITYPVEKE RLDIFNLFLT PEGVSPAKIR HADLTLMMLQ LVASGRGVAG
LPNWALFEYL QKDYVVARRL GKEGIWNTLY AAVREEQQGM AYLQDFIKTA ITCCFKDLKG
IKVADCEQPS FTK