| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1459 |
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| Symbol | |
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| ID | 4626018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1800277 |
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| End bp | 1803957 |
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| Gene Length | 3681 bp |
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| Protein Length | 1226 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639796665 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_942875 |
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| Protein GI | 119945195 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAT TAAATAAAAT GAATACCACT AAAACAGAAC TTGTCGTCCA ACCGCTTAAT
GCATTAACTT TTCCTCTGTA CGGGCAACGT TTAATTGAAG CCTCTGCAGG CACAGGTAAA
ACCTATACCA TTGCCAGTTT GTTTATTCGC CTGTTACTCG GTCACGGTGA ACAGGCTGCG
CATCAAGGTC CTTTGACCGT TGACCAAATT TTAGTGGTCA CTTTTACCGA AGCTGCAACA
GCCGAGCTAC GTAACCGTAT TAGAGAGCGT ATTCAAGATG TACGTTTAGA TTTTATTCAA
GGTGAGAGTG ATAATCCTTT TACCCAAAGT TTGCTTAAGG AAGTAGTCGA TCATCAGGTT
GCTATTCGTT TATTACGTTT TGCTGAACTG CAAATGGATG AAGCTGCTAT CTTTACTATT
CATGGTTTCT GCCAGCGAAT GCTGATGCAA AATGCCTTTG AGTCGGGCAG TTTATTCGAA
CAAAATTTAT TAGAGGACGA TGCTCAGTTA TTACAGTTAG CCTGCAATGA TTTCTGGCGC
ACTTTTTTCT ATGGTTTATC CACACCTCTG ACCGAACTTA TTTTTAGTTA TTGGGAGAAT
CCCGGGCAGC TGCAGAAAAA TTTACGGCCG TTTTTATCAC GCAGCGATCT GCATTTTTTA
CCGAAAATTA ATGATTTTGA TTTTAAAGCT AAGTATGAGC GCAGTATATC ATTCATTGAA
ACCCTTAAAA TAAACTGGCT TAATGATCAG TCGGATTATG CTGATATTAT TACCCATTCC
GCGGTTTCTA AACGCAGCTA TAGCAAGAAA AATATCCCTA ACTGGTTGAA AGAGGTCTCT
CAATGGGCGT TAACCTCCAG CGCCAGTTTA AGTTTACCTA AAAGCCTGGT TAAATTTTCA
CAAAAAACAT TAGATGAAAA AACACCCAAG GGTGAGATCC CAACACATCC GGTCTTTAGT
GAGATTGAAG CGCTGTTAGC ATTGGACCTC TCATTAGAAA ATACTATTTT GGTAAAAGCC
ACCCATTGGG TGCAAGCACA TCTGCAATCA AATAAAAATA AACAGATGTT ATTGGGTTTT
GATGACTTGT TAACACGCTT GGATGCGGCA CTGCAAAACG GCAATGAAAA GAGTCTTGCC
TTGAATATTA GGACGGCATA TCCGATTGCT CTGATCGATG AATTTCAAGA TACCGATCCG
GTTCAATACC GTATTTTTAC CACTATTTAT CAGTCCCTTG AAGGCGAAGA TTCCGAACCG
CTTGATAAAA GTCTGGGTTT ATTTATGATT GGCGATCCCA AGCAGGCGAT TTACAGCTTT
CGTGGCGCTG ATATTTTTAC CTATATGAAA GCGCGCCAGA ATGTCAGTGC GCATTACAGC
TTGGATTATA ACTATCGTTC CACGCCCGAA ATGATTGATG CTAGTAATAC CTTTTTTGAA
TTTTGTCCCG CACCCTTTAT TTATAATGAT GATATCCCCT TTAGTGCGGT GCAGGCACCC
GATAAGCGAC GTAAAAAATT AGTGGTGGAG AATAAAGACG ATCCTGCCCA AAGCGCATTA
CAGTTTATTC ACCCCGTTGG CGGAGAAAAT AGTCAAGGTT TCAAAGATTC AATAACCCAT
GCCTGTATCA ATGAAATCAA AAAAATACTG TTATTAGCCC AGCAGGATAA GGCTTATCTG
GAAGATAAAA AGGGTAAAAG AAGTATTATT AGGGCAAACC ATATCGCAGT CCTAGTGCGC
ACTGGAAAAG AAGCACAGTT GATTCGTAAC GCTTTATTTA ATGAAAATAT TAACAGTGTT
TATTTGTCAC TCAAAGAGAG TGTCTATGCA ACATCCCATG CAAAGGACCT ATTGCGTATT
TTACAGGCTT GTTTAAACCC TGAAAATGAG CGTTTATTAC GCGCAGCGAT CGCCTGTAAA
CTGTTCTGTC AAACACCTTA TCAAGTGCAT CAAATTTTAT TGAATACCCG CTTATGGGAA
GAGAAAATAG GGCAATTTAT AGAGTACCGC AGACAATGGC GCAGTGTGGG TATTTTGGCA
ATGTTACATA AATTATTTCA TCAACAGGCA ATAAGCGCTT ATTTACTTAA AGATACTCAG
GGCGAACGTT TATTAACAGA CGTATTACAT TTAGCGGAGT TATTACAAAA AAACAGTGTT
GACCATGATG GTGAGTTTGC TTTGTTACGC TGGTTCGGTG AGCAGATAAA ACAAGGAAAT
AGCGGTGAAA GTGAGCAAAA ACAACGTTTA GAAAGTGAAA AAGATCTGGT TCAGGTGAGT
ACGTTACATA AAGCAAAAGG GCTACAATAC GATATTGTGT TTATGCCTTT TACGGGGTTA
TATCAAAAAC CTCAAGCCTG TTTATATCAT GATCCTGACC AGAATAATGC GCTTATTTTT
GATCTGCAAA ATACCAAGAA TAATGCTGCC CTCGCTGAAA AAGAGCAGCT GGCGGAAGAT
TTGCGCTTAT TGTATGTCGG TCTGACGCGC AGTGTTTACC GTTGTTACAT TGGTATTGGC
AATTACAAAA AAGGGCGCGA GAAAAATAGT CCGCTGTGTA AAAGCGCGCT GGGTTATATC
TGCTTACAGG CGGGTAAGGG TCTGTTAGCC GGTGATACCG AACAATTAAA TAAACAGTTA
CAAAAAATGG CTGACAATAG TCTGAATATA AGCATCCGCC CAACGCCATT GTTGGATGAA
ACGCACTATC AGGCCAGACA AAGCGATCAA CCTTTACAAG CCCCCTTGGT GCTCGGAAAA
CAGGTTGAAA GGAATTGGTG GATCAGCAGT TATTCATCAT TGTCACGCTT TCATACACAG
ACTAATACTC AGGTAGCTTC AGTGACACCT ACCGTTATGC CTATAGATAA TATCAGCAAT
GAACAGACTG AAGTGTCACC CGCTATTTTA ACCAGTCCCG AAAAAACACC CTTTAGTTTT
CCCCGAGGGG CTAAGCACGG CACCTTTCTA CATGAATTAT TTGAGTTAAC TAACCTTGAA
AATATGGAAA CTGAAACGCT CAATGAACTG TTATTTGAGC AACTCTTATT ACGCCATTAT
CCGGATCCGG AATTGTGGGC TCCAGTATTA ACCGCTTGGA TAGAGCAGAT TCTAGGTCAT
GACTTAGCTG CCGGCGCTGA TATTAAATTA GGTGATTTGT CTGCCCAGCA GAAAAAAATT
GAAATGCAGT TTTTTATTCC CATGCAGGAA CTGCAGGCAA ATGAGGTCAA TAACCTATTA
AAAAAATATG ATCCATTATC TGCGCGTGCG GGGGAGTTGC AGTTTCGGAC AGTACAGGGG
TTTTTAAAAG GTTTTATCGA TTTAACATTC GAAAAAAATG GACAATATTA CGTGCTTGAT
TATAAATCTA ATCATCTTGG TGACTGTTTG CAGGATTATA ATCAAACTAG TATGGAGCAG
GCCTTGATTG AACACCGCTA CGATTTTCAA TACCAGCTTT ATACTCTGGC GCTGCATCGT
CTGCTTAAAT CTCGTTTAGC AGATTACGAT TATGAAACCC ATATTGGCGG GGTTTTTTAT
ACCTTTTTAC GGGGTATGCA GGGCGAACAG GAATACGGCG TTTATTTTGT TAAACCCAGT
TTTAGTCTGA TAGACGGGCT TGATAAACTG TTTTCAGGGC AAAAAAACAG TGCTAAATCA
ACAGTGGAGC CGATATGTTA A
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| Protein sequence | MDKLNKMNTT KTELVVQPLN ALTFPLYGQR LIEASAGTGK TYTIASLFIR LLLGHGEQAA
HQGPLTVDQI LVVTFTEAAT AELRNRIRER IQDVRLDFIQ GESDNPFTQS LLKEVVDHQV
AIRLLRFAEL QMDEAAIFTI HGFCQRMLMQ NAFESGSLFE QNLLEDDAQL LQLACNDFWR
TFFYGLSTPL TELIFSYWEN PGQLQKNLRP FLSRSDLHFL PKINDFDFKA KYERSISFIE
TLKINWLNDQ SDYADIITHS AVSKRSYSKK NIPNWLKEVS QWALTSSASL SLPKSLVKFS
QKTLDEKTPK GEIPTHPVFS EIEALLALDL SLENTILVKA THWVQAHLQS NKNKQMLLGF
DDLLTRLDAA LQNGNEKSLA LNIRTAYPIA LIDEFQDTDP VQYRIFTTIY QSLEGEDSEP
LDKSLGLFMI GDPKQAIYSF RGADIFTYMK ARQNVSAHYS LDYNYRSTPE MIDASNTFFE
FCPAPFIYND DIPFSAVQAP DKRRKKLVVE NKDDPAQSAL QFIHPVGGEN SQGFKDSITH
ACINEIKKIL LLAQQDKAYL EDKKGKRSII RANHIAVLVR TGKEAQLIRN ALFNENINSV
YLSLKESVYA TSHAKDLLRI LQACLNPENE RLLRAAIACK LFCQTPYQVH QILLNTRLWE
EKIGQFIEYR RQWRSVGILA MLHKLFHQQA ISAYLLKDTQ GERLLTDVLH LAELLQKNSV
DHDGEFALLR WFGEQIKQGN SGESEQKQRL ESEKDLVQVS TLHKAKGLQY DIVFMPFTGL
YQKPQACLYH DPDQNNALIF DLQNTKNNAA LAEKEQLAED LRLLYVGLTR SVYRCYIGIG
NYKKGREKNS PLCKSALGYI CLQAGKGLLA GDTEQLNKQL QKMADNSLNI SIRPTPLLDE
THYQARQSDQ PLQAPLVLGK QVERNWWISS YSSLSRFHTQ TNTQVASVTP TVMPIDNISN
EQTEVSPAIL TSPEKTPFSF PRGAKHGTFL HELFELTNLE NMETETLNEL LFEQLLLRHY
PDPELWAPVL TAWIEQILGH DLAAGADIKL GDLSAQQKKI EMQFFIPMQE LQANEVNNLL
KKYDPLSARA GELQFRTVQG FLKGFIDLTF EKNGQYYVLD YKSNHLGDCL QDYNQTSMEQ
ALIEHRYDFQ YQLYTLALHR LLKSRLADYD YETHIGGVFY TFLRGMQGEQ EYGVYFVKPS
FSLIDGLDKL FSGQKNSAKS TVEPIC
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