Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1458 |
Symbol | |
ID | 4626017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1796742 |
End bp | 1800191 |
Gene Length | 3450 bp |
Protein Length | 1149 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639796664 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_942874 |
Protein GI | 119945194 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTCGAG TATATCATTC AAATCAACTG GCGCTTTTAA AAGATTTATT GGTGGCTTTA ATGCAGGGGG CGAAGCTGAC AGACCCTTTT GCAAGCGAAA CGATCCTAGT GCAAAGCCCG GGTATGGCAC AGTGGTTACA ATTAGAAATA GCACAATCAA CGGGGATCAG TGCAAATATT GATTTTCCTT TACCTGCAAG TTTCATCTGG CAGCAATTTA AACATGTTTT AAAAGATGTG CCGGATAAAA GCCCCTTTAA TAAAATGTCG ATGACCTGGC AGATTATGCG GCTCTTACCC GATTGTTTAG AGGATCCTGA TTTTTCTGCT TTATTACATT ATCTCGAAGA TGATTTATAC CTGCGTAAGC GTTTCCAACT AAGCCAAAAA ATCGCTGATA TTTTTGATCA ATATTTAGTT TATCGTCCGG AATGGATTGC AGCTTGGGAA AATGCCTCTG AACAGGAAAT CAGCCAGTGG CATGCTGAAA ACACCGAATC GATACCTGCG TGGTTAGAGG ATCAGCGTTG GCAAGCCAAA TTATGGAAAA AACTCACTCT GACTATTGCC GAGTCATTTA AAGCGCAGGG TAAAGCCTAC CACCGTGCGG GTTTATATAA AGACTTTTTA GACACACTGG CCACTAAAAA AACACTGGAG CATCTGCCTA AGCGTATTTT TGTATTTGGT ATATCGGCAC TGCCTGAATC TTATCTGCAG GCGTTATTAG GACTCGCTGA ACATTGTGAT GTGCATTTTT TGTTAACTAA TCCCTGCCGT TATTATTGGG CTGATATTGT TGATCCTAAA TTGTTAGCCA AACGTTTTGC GCAAAGTCGT CAGAAATTAA CTGTCAGTGG CGGTGAAATA AAAAATTTAC CCGACTCCAG CTGGCAAAAA GATGCGTCGC ATTTACAGTG GTCACAAAGC AATGATCCTG ACAATGAAGT GGGTAATCCT CTTTTGGCTT CTATGGGTAA AATGGGACGT GATTTTCTTT TCCAGTTGTA CTCGTTAGAA CAACAGGAAG TGGATGCTTT TGTTGATATT ACGCGTGATA GTTTATTGCA TCATATTCAA GCGGATGTCT TAGACCTGCA GGACAGCAGT CAGGCATTAA GCAAGGATCC TAGCGCGCGT ATTAGCCTTG CTCCGGAAGG TAACTCTCTC ACCCTACATT TATGCCACAG TGTGATGCGC GAAGTGGAAA TATTACACGA TAACCTGCTG GCAATGTTTG CGGCAGATAA TAACCTCACG CCAAAAGATA TTATAGTGAT GGTGCCTGAT ATCGATCAAT ATGCCCCCTA TGTACAGGCG GTATTTGCCA GTGTAGAACA AAATCGTTAT ATCCCCTTTA GTATTTCTGA TGTCAGTGCT CAGCAAGAAA ATCCTATTTT GATCAGTTTC TTACAGTTAT TGAATCTCAA CCAGACACGT TATACTCGGG AAGATATTTT AGCCCTGCTG GAGGTGCCTG CCATATTACA GCGTTTTAAC TTGAATCAAG ATGAGTTTGT GTTGTTACAA AAATGGATCA ACGAAAGTGG TATTCGTTGG GGCTTAGATG AAAAAAGTGC TGCACAGTGG GATTTACCCA GACTGTCGCA GAACAGCTGG TTATTTGGCA TCAGGCGCAT GCTGCTCGGT TATGCCATAA GTGATACTTT GTTTGAAGGT ATCTCAGCCT ATGATGAAAT ACAGGGTTTG CAGGGGGATT TGTTAGGCCG TTTTATCGAC TTTATTGATG CTTTAATAAA GTTACAAGAG GGTTTAAAGC AGTCTTATAA TGCCAATCAA TGGCAGGCTT TTGTGTACCA ACTGCTGGAA GACTTTTACC AGGAAGATGA CGACAACACC ATGGTCTTAT CTCTTATCCG TAATGAAATG GATAATTTAT TAGACCATAC TGGGCAAGCT GATTTTACTC AACCTATCTC ATTGTTTGTC TTAATTGAGC ACCTAGAGCA GCATCTGTCG GATCAGGGAA ACAGCCAGCG TTTTTTAGCG GGGCAAGTTA ACTTTTGTAC CCTGATGCCG ATGCGTTCTA TTCCCTTTAA AGTTGTTTGC CTGTTAGGCA TGAACGATGG TCAATACCCC CGTAATATTG TTCCTATGGG ATTTGATTTG ATGGCAGGGC ATCGTAAGCG AGGTGATCGC TCGCGTCGGG AAGAAGATCG ATATCTCTTT TTAGAAGCAC TGCTGTCGGC ACAGGAAAAA TTTTATATCA GTTATATTGG CCGGGATATT AATGATAACA GTGAAAAAAT GCCCAGCGTA TTAGTCTCGG AGTTACTTAA CTATTGCCAG CAAAGCTTTG TATTAAAAGA TAATCAGCAG GATCAAAACC GGGTTGCAGA AAAAGCGCTC AAGGCGTTTA TCTCTTTTCA CTATCCGATG CAAAGTTTTA GTGAACGTTA TTATCAGGGC GATGTTAAAA CCTACAATCC GAACTGGTGG GCGGCATTAA AGGATGCTAA AAATGCAGGG GAAAAGAGTC ACAAGCGCCT TCTGACTCTG GATCAATCCT TAACTGAAGT ACCATTAGAG CAATTAAAAC AATTTTTAAA ACATCCCTGC AAGGTGTTTT TTAATCAGCG CTTGGATGTC TACTTTGAAT TAGATGACGA TCAACAGGAA AATGATGAAC CCTTCTCTTT TAATCATTTG CAGCAGTATG TTCTTAAACA TGAACAGTTT GAATATGCTC TGGAGGGAAA ATCATTAGAT AATCTTTTTA TTGAAAAGAG GGCTGCTGGT AAATTACCTT TTGGCGAATT TGCAGCACTG ATTTTCACTA AAGATCTCGA GCCAATGGAG AACTTGGCGG ATTTAACCAC GAGTTATTTT ATAGGTGAGA TTGAAACCAT TAATATTGAT ATTCAGTTTG CTGAAAAACG TTTATTCGGT GAGTTAAATG ATCATTGTGA AAAAGGATTA GTACGGGTTA AAACTGGGAA TATTAAAGGC AAGGATATTT TAACTCTTTG GTTGGAGCAT CTTTGTTATT GTATCGCTTC CGGCCAAAAT CTGAACTCCA CTCTGCTTGG GCAGAAAGAG GGGTTCTATT TTAAAGAGCT GCCTGCGGAT TATGCCTACA ACAGAATAAG TGAACTGCTT GCGTTATATG AAGCGGGTTT GCAGCAACCG CTGCCTTTCT TTATACAGAG TGCTTTTGCC TGGTGTGAGC AGGTGCATAA ACTTGAGCCC AATTGTTTTG TCTTTGATGA TTTGGAGTTT GCAACTATTG CCGAAGCCCA GCAGGTGGCA TCGCTCTGTT TCTCAAATGA TCGTGGTTTT TCGGAAGGAC AGGATCCTTA TATCAATCGA TGTTATGAAA ACCTGGAAGA CCATTGGGAT GCTTTTCAGC CTTTAGCATT GAAAATATTT ATGCCGATTT TGTCTAATAT AAAGCCAATT GATTACGATG ACTTAGATGG TGACGAATAA
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Protein sequence | MFRVYHSNQL ALLKDLLVAL MQGAKLTDPF ASETILVQSP GMAQWLQLEI AQSTGISANI DFPLPASFIW QQFKHVLKDV PDKSPFNKMS MTWQIMRLLP DCLEDPDFSA LLHYLEDDLY LRKRFQLSQK IADIFDQYLV YRPEWIAAWE NASEQEISQW HAENTESIPA WLEDQRWQAK LWKKLTLTIA ESFKAQGKAY HRAGLYKDFL DTLATKKTLE HLPKRIFVFG ISALPESYLQ ALLGLAEHCD VHFLLTNPCR YYWADIVDPK LLAKRFAQSR QKLTVSGGEI KNLPDSSWQK DASHLQWSQS NDPDNEVGNP LLASMGKMGR DFLFQLYSLE QQEVDAFVDI TRDSLLHHIQ ADVLDLQDSS QALSKDPSAR ISLAPEGNSL TLHLCHSVMR EVEILHDNLL AMFAADNNLT PKDIIVMVPD IDQYAPYVQA VFASVEQNRY IPFSISDVSA QQENPILISF LQLLNLNQTR YTREDILALL EVPAILQRFN LNQDEFVLLQ KWINESGIRW GLDEKSAAQW DLPRLSQNSW LFGIRRMLLG YAISDTLFEG ISAYDEIQGL QGDLLGRFID FIDALIKLQE GLKQSYNANQ WQAFVYQLLE DFYQEDDDNT MVLSLIRNEM DNLLDHTGQA DFTQPISLFV LIEHLEQHLS DQGNSQRFLA GQVNFCTLMP MRSIPFKVVC LLGMNDGQYP RNIVPMGFDL MAGHRKRGDR SRREEDRYLF LEALLSAQEK FYISYIGRDI NDNSEKMPSV LVSELLNYCQ QSFVLKDNQQ DQNRVAEKAL KAFISFHYPM QSFSERYYQG DVKTYNPNWW AALKDAKNAG EKSHKRLLTL DQSLTEVPLE QLKQFLKHPC KVFFNQRLDV YFELDDDQQE NDEPFSFNHL QQYVLKHEQF EYALEGKSLD NLFIEKRAAG KLPFGEFAAL IFTKDLEPME NLADLTTSYF IGEIETINID IQFAEKRLFG ELNDHCEKGL VRVKTGNIKG KDILTLWLEH LCYCIASGQN LNSTLLGQKE GFYFKELPAD YAYNRISELL ALYEAGLQQP LPFFIQSAFA WCEQVHKLEP NCFVFDDLEF ATIAEAQQVA SLCFSNDRGF SEGQDPYINR CYENLEDHWD AFQPLALKIF MPILSNIKPI DYDDLDGDE
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