Gene Ping_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1443 
Symbol 
ID4625505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1776853 
End bp1777320 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content43% 
IMG OID639796649 
Productriboflavin synthase 
Protein accessionYP_942859 
Protein GI119945179 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA TTGAAGGTGG CTTAGCGGCA CCACAAGCGC AGATCGCAAT CGTTATCTCT 
CGTTTTAATA GCTTTATTAA CGAGCAGTTA TTAGCAGGAG CAATCGATAC CCTTAAGCGT
ACTGGTCAAG TTGCTGATGA TAATATTACT GTTGTACGTG TCCCTGGTGC CGTTGAGCTT
CCATTGGTCG CTAAACGTGT TGCCGCCTCT AAAAAGTTCG ATGCCATTAT CGCATTAGGG
ACTGTTATTC GTGGTGGTAC ACCCCACTTT GAATTTGTTG CTGGCGAATG TAATAAGGGC
CTTGGTCAAG TCTCTATGGA CTTTGATATA CCGGTTTCCT TCGGGGTATT AACAACTGAT
TCAATAGAAC AAGCGATTGA ACGTGCGGGA ACTAAAATGG GTAATAAAGG CAGTGAAGCG
GCCTTAAGCG CATTAGAAAT GGTCAATGTT ATGGCGGAGT TTAAATAA
 
Protein sequence
MKIIEGGLAA PQAQIAIVIS RFNSFINEQL LAGAIDTLKR TGQVADDNIT VVRVPGAVEL 
PLVAKRVAAS KKFDAIIALG TVIRGGTPHF EFVAGECNKG LGQVSMDFDI PVSFGVLTTD
SIEQAIERAG TKMGNKGSEA ALSALEMVNV MAEFK