Gene Ping_1441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1441 
Symbol 
ID4625503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1774814 
End bp1775476 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content39% 
IMG OID639796647 
Productriboflavin synthase subunit alpha 
Protein accessionYP_942857 
Protein GI119945177 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACAG GAATTATAGC GGCAGTCGGT AAGGTGACTG CCATTAAAAA AAATGCCAAA 
GATATCACCA TTAGCGTCGA TGCAGGGAGC CTTGATTTAA GTGATGTAAA AGTGGGTGAT
AGCATTTCAA ATAATGGTGT TTGCTTAACG GTGACCAAGT TAAGTGATAA AAGTTTTAAT
GCCGATCTTT CTAACGAGAC GTTAAAGCGC AGTGGTTTTT CTCAGATTAA AAATGGTTTT
GTGCTTAATT TAGAAAAAGC AATGCAAATG AATGACCGTT TTGGTGGACA CATTGTTAGC
GGGCATGTGG ATGGTGTGGG TGAAGTGATA TCCGTTGACC CCCTTGGCAA TGCCGTTGAA
TACTGGATTA AAGCGCCCGA TGAATTGGCT AAATATATTG CAGAAAAAGG ATCTATTACC
GTTGATGGTG TGAGTTTAAC CACCAATGAA ATTAACGGTG CTGCTTTCAA ATTGACTATT
ATCCCGCACA CAATTTCGCA AACGACTATG GTGAACTATA AAGTGGGCAC CCAAGTCAAT
TTAGAAGTTG ATGTTATTTC ACGTTATTTA GAACGTTTAA TGCTGGGTGA TAAAGCCTCG
ACAAGTCAAC ATGATAATAA ATCAACCATG GATCTGCTCG CTAAAAGTGG TTTCTTAGGT
TAA
 
Protein sequence
MFTGIIAAVG KVTAIKKNAK DITISVDAGS LDLSDVKVGD SISNNGVCLT VTKLSDKSFN 
ADLSNETLKR SGFSQIKNGF VLNLEKAMQM NDRFGGHIVS GHVDGVGEVI SVDPLGNAVE
YWIKAPDELA KYIAEKGSIT VDGVSLTTNE INGAAFKLTI IPHTISQTTM VNYKVGTQVN
LEVDVISRYL ERLMLGDKAS TSQHDNKSTM DLLAKSGFLG