Gene Ping_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1439 
Symbol 
ID4625501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1773119 
End bp1773574 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content43% 
IMG OID639796645 
ProductATP-cone domain-containing protein 
Protein accessionYP_942855 
Protein GI119945175 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTGTC CTTTTTGTAA TGCTCAAGAT ACTAAAGTTA TCGACTCACG CTTAGTTTCA 
GAAGGATCTC AAGTTCGTCG CCGGCGCAGC TGCAATGAAT GTAATGAACG TTTTACCACC
TATGAATTTG CCGAACTGTT GATGCCGCGT TTGATTAAGT CCGATGGCCG TCGTGAACCC
TTTAATGATG ACAAATTGCT GGTCGGTATT AACCGTGCCT TGGAAAAAAG ACCCGTGAGT
CTGGAGGATA TTGATGCTGC GGTTAACAAA CTTAAATCAA CCCTGCGGGC AACGGGCGAG
CGTGAAGTGA CTTCTAAAAT AGTCGGTGAA CTGGTTATGG AATTACTTAA GGGGTTAGAT
AAAATTGCCT ATATCCGTTT CGCGTCGGTT TACCGCTCCT TTAAAGATGT TAAAGAGTTT
GGTGAGGAAA TAGCCAAGCT TGAGACTGAT TTTTAG
 
Protein sequence
MYCPFCNAQD TKVIDSRLVS EGSQVRRRRS CNECNERFTT YEFAELLMPR LIKSDGRREP 
FNDDKLLVGI NRALEKRPVS LEDIDAAVNK LKSTLRATGE REVTSKIVGE LVMELLKGLD
KIAYIRFASV YRSFKDVKEF GEEIAKLETD F