Gene Ping_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1438 
Symbol 
ID4625500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1771646 
End bp1772911 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content45% 
IMG OID639796644 
Productglycine hydroxymethyltransferase 
Protein accessionYP_942854 
Protein GI119945174 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAACC GTGATATGAA TATTGCCGAT TATGATCCAG AATTATGGCA GTCAATAACT 
GATGAAGTTC AGCGCCAAGA AGACCATATT GAACTGATTG CATCAGAAAA TTACACCAGC
CCACGTGTAA TGGAAGCGCA AGGCAGTCAG TTAACTAATA AATACGCAGA AGGTTACCCG
GGTAAACGTT ATTACGGCGG TTGTGAATAC GTTGATGTGG CTGAATCTTT AGCTATCGAA
CGTGCTAAAT CTTTATTTGG TGCTGATTAT GCAAACGTCC AGCCTCACTC GGGTTCGCAG
GCTAATGCAG CCGTTTATCA GGCGCTTTGT GCACCGGGTG ATACTATTCT GGGCATGAGT
CTTGCCCATG GTGGACATTT AACCCACGGT TCCCACGTCA GTTTTTCTGG TAAAATGTAC
AATGCTGTGC AATATGGAAT CACCCCTGAA ACGGGTATTC TAGATTATGC GGAAATTGAA
CGTCTTGCTG TCGAACATAA ACCAACCATG ATTATTGCAG GGTTTTCTGC TTATTCGGGT
ATTGTTGACT GGGCCAAATT TCGCGAAATA GCGGATAAAG TAGGCGCTTA TCTGTTTGTT
GATATGGCGC ACGTTGCAGG GCTAGTGGCT GCGGGTCTTT ACCCGAATCC AGTGCCTTTT
GCCGATGTGG TGACTACGAC AACGCATAAA ACCTTAGGCG GTCCGCGTGG CGGCCTGATC
CTTGCTAAAG CCAATGAAGC CATTGAGAAA AAATTAAACT CAGCGGTTTT CCCAGGCCAG
CAAGGTGGTC CACTAATGCA CGTTATTGCA GCTAAAGCGG TTGCATTTAA AGAGTGTGCT
GAACCTGAAT TTGCTGTTTA CCAGCAACAG GTTTTAGATA ATGCTAAAGC CATGGTTAAA
TCATTCCTGG CGCGTGGTTA CAAAATCGTT TCTGGCGGTA CTGAAAACCA TTTATTCCTG
GTTGATTTAA TCGCTCAGGA TATCACCGGT AAAGAAGCGG ATGCCGCCTT AGGTAATGCG
CATATTACGG TTAACAAAAA CTCAGTGCCA AATGATCCCC GTTCTCCTTT TGTGACTTCA
GGTTTACGTA TTGGTACGCC GGCACTCGCA CGTCGTGGTG TTAATGCACA ACAATCTGCT
GAGCTTGCGT TATGGATGTG TGACGTTCTT GATGCAATCA AAGATGAAGC TAAACTTGCG
ACCACCATTA CAGCGGTTAA AGTTAAAGTG GCCGCTCTTT GTAAAGCTTG CCCTGTTTAC
GGATAA
 
Protein sequence
MFNRDMNIAD YDPELWQSIT DEVQRQEDHI ELIASENYTS PRVMEAQGSQ LTNKYAEGYP 
GKRYYGGCEY VDVAESLAIE RAKSLFGADY ANVQPHSGSQ ANAAVYQALC APGDTILGMS
LAHGGHLTHG SHVSFSGKMY NAVQYGITPE TGILDYAEIE RLAVEHKPTM IIAGFSAYSG
IVDWAKFREI ADKVGAYLFV DMAHVAGLVA AGLYPNPVPF ADVVTTTTHK TLGGPRGGLI
LAKANEAIEK KLNSAVFPGQ QGGPLMHVIA AKAVAFKECA EPEFAVYQQQ VLDNAKAMVK
SFLARGYKIV SGGTENHLFL VDLIAQDITG KEADAALGNA HITVNKNSVP NDPRSPFVTS
GLRIGTPALA RRGVNAQQSA ELALWMCDVL DAIKDEAKLA TTITAVKVKV AALCKACPVY
G