Gene Ping_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1428 
Symbol 
ID4625490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1753879 
End bp1755771 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content42% 
IMG OID639796634 
Productnitrous-oxide reductase 
Protein accessionYP_942844 
Protein GI119945164 
COG category[C] Energy production and conversion 
COG ID[COG4263] Nitrous oxide reductase 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGT ATAAAAGCGA TCTACCCAAC GATGAAAAAC TGGAAAATTC AGACCGACGT 
AAATTTTTTG GTAAAAGTGC GGCCTTTGGC GTAGCGGCAG CTGCCGTGCC AATGTCAGCG
GTCATGTTTT CCTCTATGGC AAAAGCGCAG GCGGCTGAGG CAAGCAATAG CACCGCCGTC
CATCCTGGTG ATTTAGATGA ATATTATGGC TTCTGGAGTG GCGGTCAGTC AGGCGAAGTC
CGTATTATGG GTATTCCTTC AATGCGTGAA TTAATGCGTA TTCCGGTTTT TAATTTGGAC
AGTGCAACGG GTTGGGGATT AACTAACGAA AGTAAACGTA TTAAAGGCGA CAGTGCCCAT
TTTATGACCG GGGATGCACA TCATCCGCAC ATGAGTATGA CCGATGGTCG TTATAACGGT
GAGTATCTTT TTATTAACGA CAAAGCTAAC TCACGTGTTG CACGTATTCG TTGCGATGTC
ATGAAAACCG ATAAAATGAT CACTATTCCT AACGTACAAG GGGTCCATGG TTTACGTGTT
CAGAAAGTAC CTGAAACTAA ATATGTGATT TGTAATGGTG AGTTTGAAAT TCCAATGAAT
AATGACGGTA AAGCGTCACT GGAAGATGTC AGTACTTATC GTTCATTATT TAGTGTGATT
AACGCGCAAA CAATGGAAAT TGCTTTTCAG GTGATGGTCG ACGGGAACTT GGATAATACC
GATGCCGATT ACGACGGCAA ATATTTTGCA TCTACTTGTT ATAACTCAGA AATGGGCATG
ACCTTAGGGG CCATGATCAC AGCAGAACGT GACCATGTGG TGGTCTTTAG TTTAGCGCGT
TGTGAAGCCG CCGTTAAAGC GGGTAAATTC AAAACTTATA ACAGTAATAA TGTCCCTGTA
TTAGACGGCC GTAAAGGATC AAAACTTACC CGTTATATTC CAGTCCCTAA ATCACCCCAT
GGTGTTAATA CCTCACCTTC TGGCAAATAT TTTATTGCTA ACGGCAAGTT GTCTCCCACA
GTTTCTATTA TTTCGATTGA GAAATTAGAT GCCTTATTTG ATGATAAAAT TAAACCACGC
GATACAGTAG TTGCAGAGCC TGAATTAGGT TTAGGGCCAC TGCATACTGC CTTTGATAAC
AAAGGAAATG CTTATACCAC TCTGTTTATT GACAGCCAGA TAGCCAAATG GAATATTGAA
GATGCGATCA AAGCGCATAA TGGTGAAAAA GTGAAATATC TTCGCCAGAA ACTGGATGTA
CATTATCAAC CCGGTCATAA CCATACTTCT ATGGGTGAAA CTCGTGATGC AGACGGCAAA
TGGTTAGTGG TACTGAGTAA ATTCTCTAAA GATAGATTTT TACCTGTTGG TCCGTTACAT
CCAGAAAACG ATCAGTTAGT TGATATTTCC GGTGACGAAA TGAAACTGGT CCATGACGGC
CCCGCTTTTG CTGAACCCCA TGATTGTATT TTGGTTCACC GCAGTAAAAT AAGAACAGCA
AAATTATGGA CACGTGATGA CCGCATGTTT GCTGAAACCG TTGCCATGGC TAAAAAAGAT
GGCGTTAATG TTGATACCGA CAATAAAGTC ATTCGTGATG GTAATAAAGT GCGAGTATAC
ATGACCTCCG TTGCGCCTAT GTATGGCATG ACTGAATTTA AAGTGAAGCT TGGAGATGAA
GTGACCGTCG TGGTGACTAA CCTCGACATG GTAGAAGATG TTACCCATGG TTTCTGTATG
ATTAACCACG GTGTGCAGAT GGAGATTGGC CCGCAGGCAA CCTCATCTGT TACTTTTACC
GCAAGCCAAC CTGGTGTGCA GTGGTATTAC TGTAACTGGT TCTGTCATGC ATTACATATG
GAAATGCGCG GTCGTATGTT AGTCGAAGCA TAA
 
Protein sequence
MSKYKSDLPN DEKLENSDRR KFFGKSAAFG VAAAAVPMSA VMFSSMAKAQ AAEASNSTAV 
HPGDLDEYYG FWSGGQSGEV RIMGIPSMRE LMRIPVFNLD SATGWGLTNE SKRIKGDSAH
FMTGDAHHPH MSMTDGRYNG EYLFINDKAN SRVARIRCDV MKTDKMITIP NVQGVHGLRV
QKVPETKYVI CNGEFEIPMN NDGKASLEDV STYRSLFSVI NAQTMEIAFQ VMVDGNLDNT
DADYDGKYFA STCYNSEMGM TLGAMITAER DHVVVFSLAR CEAAVKAGKF KTYNSNNVPV
LDGRKGSKLT RYIPVPKSPH GVNTSPSGKY FIANGKLSPT VSIISIEKLD ALFDDKIKPR
DTVVAEPELG LGPLHTAFDN KGNAYTTLFI DSQIAKWNIE DAIKAHNGEK VKYLRQKLDV
HYQPGHNHTS MGETRDADGK WLVVLSKFSK DRFLPVGPLH PENDQLVDIS GDEMKLVHDG
PAFAEPHDCI LVHRSKIRTA KLWTRDDRMF AETVAMAKKD GVNVDTDNKV IRDGNKVRVY
MTSVAPMYGM TEFKVKLGDE VTVVVTNLDM VEDVTHGFCM INHGVQMEIG PQATSSVTFT
ASQPGVQWYY CNWFCHALHM EMRGRMLVEA