Gene Ping_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1425 
Symbol 
ID4625487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1750718 
End bp1751536 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content42% 
IMG OID639796631 
ProductABC-2 type transporter for copper permease protein 
Protein accessionYP_942841 
Protein GI119945161 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCTA TCTGGGCGGT GGCATTAAAA GAGTTTCAAG ATGGCGTACG TAACCGTTGG 
TTTATTTCAA TCACCTGCAT TTTTGCTCTG TTATCTATTG GCTTAAGTTA TTACGGCTCA
GTGGCATCGG GGCAAATTAC CCCGCCTTCG TTATCCACTA CTATTGCGAG CTTATCCAGC
TTGTCAGTGT TTATTATTCC TCTGATCGCA TTATTACTTT GCTATGACAG CTTTGTGGGT
GAGCAGGAAT CCGGCACTTT ACTGTTACTG CTGACTTACC CTGTTAGTCA TACTCAGCTG
CTGCTGGGTA AATTTATCGG TCAAGGCAGC ATTATTACGC TGGCAACTAT TATAGGTTTT
GGCAGTGCCG CTATTTTGTT AGGTTTTAAT ACCGACTTTG CAACGGTATT ACCCACCTTT
GCATTGTTTA TTTTAACGGC TAGTTTGCTC GGTCTTAGTT TTATTGGGTT AGCTTATATT
ATCAGTTTAT CAGTAACAGA AAAGTCTAAA GCGGCAGGTA TGGCACTGAT CCTGTGGCTG
TTTTTTGTAT TGATTTTTGA TCTGGGATTA TTAGCGATTT TAATCGGTGT TAAGGATGGG
GTCTCGCAGC AGGGACTAGT GCAGTTGATG CTCTTTAATC CGGCTGATTT ATTTCGCCTG
ATTAACCTTG CAGCATTGGA CAGCGGGGAT GTTAACGGGG TATTGGCCGT TGCTATTAAC
AGTGACTATT CAGTATCAAG TTTGTTATTG ATGATGCTGG CCTGGGTTGT TTCACCCCTG
TTATTTGCGC TGTTTATTTT CAGTAAAAAA AGTATTTAA
 
Protein sequence
MSPIWAVALK EFQDGVRNRW FISITCIFAL LSIGLSYYGS VASGQITPPS LSTTIASLSS 
LSVFIIPLIA LLLCYDSFVG EQESGTLLLL LTYPVSHTQL LLGKFIGQGS IITLATIIGF
GSAAILLGFN TDFATVLPTF ALFILTASLL GLSFIGLAYI ISLSVTEKSK AAGMALILWL
FFVLIFDLGL LAILIGVKDG VSQQGLVQLM LFNPADLFRL INLAALDSGD VNGVLAVAIN
SDYSVSSLLL MMLAWVVSPL LFALFIFSKK SI