Gene Ping_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1420 
Symbol 
ID4626972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1743999 
End bp1745459 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content48% 
IMG OID639796626 
Productiron-sulfur cluster binding protein 
Protein accessionYP_942836 
Protein GI119945156 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAG CAAATAACGG CGTACAGATT GAAGATTTAG CACCGGAGCA TTTTCATGAT 
CAGGCCAAAG CAGCCCTTGC CGATCCACAG CTACGCCAAA ATTTTCGCGG CGCAATGGAC
TACTTAACAG ACAAACGTAA AATTGCTTTT TCAGATCCGA CAGAAGAAAA ACGCATTCGC
GATTTATCCG CGGCGATTCG CCAGCGCAGC CTGAGCAAAC TGCCCGATTT ACTCGAACAG
CTTGAAACTA ACTGTACAAA TAATGGTATT CAGGTGCATT GGGCAGAAAC GACCGAACAA
GCGAACAGTA TCATTGCCGG TATTGCCGGG CAGCATAATG CCAAGAATAT TATTAAAGGC
AAATCCATGG TGAGTGAAGA AATTGAACTC AACCACGAAA TGGAAAAGCT CGGTATTGAA
TGTTTAGAAA GTGATATGGG CGAATATATT GTGCAGCTCG ATGGCGATAA ACCCTCCCAT
ATCATTATGC CCGCCATTCA TAAAAACAAG CAGGAAGTCA GCGATACCTT CGAAAAACAC
CTCGATGACT TCACCCCGAC CGTCGATGTG GATGAATTGA TTAAAACCGG GCGCACCCGT
CTACGGAAAA AATTTCACGA TGCAGATATT GGCTTATCGG GGGTTAACTT TGCCGTCGCG
GAAACCGGCA CCCTGTGTCT GGTTGAAAAC GAAGGCAACG GACGTATGTG TACGACGGTG
CCCAATGTGC ATATTGCCAT TACCGGTATC GAAAAGGTGG TGGAGTTTTT AAGCGATGTG
CCGCCGCTGT ACAGCGCCCT TACCCGTTCA GCTACGGGAC AGGCCATTAC CACTTATTTT
AATATGATAA GCTCACCGCG CCGCGCGGGT GAGTTAGACG GCCCTGAAGA AGTTCACCTG
GTGCTGCTCG ATAACGGCCG TACACAAGCC TTTGCCGACG AAGAGATGCG TCAAACACTG
CAATGTATTC GTTGTGGTGC GTGCATGAAC CACTGCCCGG TGTACACCCG TATTGGTGGT
CATGCTTACG GCACGACTTA TCCTGGACCC ATTGGTCAAA TTATTTCACC CCATATGATG
GGGCTCGATA ACACTAAAGA TTTAGTGACA GCATCGAGCC TGTGCGGTGC CTGTGGCGAA
GTCTGCCCGG TAAATATTCC CATTCCAGAA ATGCTGCAGC GCTTACGTCA GGAAGCTAAA
AATTCGCCCA AAAATAATAG GCCAGCGATT AAAGGGCAGG CAGCCGCAGC CAGCAGAATA
GAGTTATTGG CAATGAAAGG ATTTGCCTTT GCAGCCTCAC ACCCTTCTCT TTATCATCTG
GGATCATGGT CAGCCACCAA GATGAGATCC TTAATGCCAA GCAAAATAGG GCCATGGACA
CAATGCCGAA CAGCCCCTAA ACCTGCCGGT AAAACCTTAC ACCAATTAAT CAAAGCACGG
AAACAGGGAC AAAAATCATG A
 
Protein sequence
MSQANNGVQI EDLAPEHFHD QAKAALADPQ LRQNFRGAMD YLTDKRKIAF SDPTEEKRIR 
DLSAAIRQRS LSKLPDLLEQ LETNCTNNGI QVHWAETTEQ ANSIIAGIAG QHNAKNIIKG
KSMVSEEIEL NHEMEKLGIE CLESDMGEYI VQLDGDKPSH IIMPAIHKNK QEVSDTFEKH
LDDFTPTVDV DELIKTGRTR LRKKFHDADI GLSGVNFAVA ETGTLCLVEN EGNGRMCTTV
PNVHIAITGI EKVVEFLSDV PPLYSALTRS ATGQAITTYF NMISSPRRAG ELDGPEEVHL
VLLDNGRTQA FADEEMRQTL QCIRCGACMN HCPVYTRIGG HAYGTTYPGP IGQIISPHMM
GLDNTKDLVT ASSLCGACGE VCPVNIPIPE MLQRLRQEAK NSPKNNRPAI KGQAAAASRI
ELLAMKGFAF AASHPSLYHL GSWSATKMRS LMPSKIGPWT QCRTAPKPAG KTLHQLIKAR
KQGQKS