| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1418 |
|---|
| Symbol | |
|---|
| ID | 4626970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 1740417 |
|---|
| End bp | 1743248 |
|---|
| Gene Length | 2832 bp |
|---|
| Protein Length | 943 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639796624 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_942834 |
|---|
| Protein GI | 119945154 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATA ACGATCAACA TAACTACCAA CAACTGCAGG ATTTGCTGAC CACAAAGATT
AATCATGAGC GTATTTTCAC CGAAGAGGCT TTGCTGCTTG CCTACGGGAC AGATGCCAGC
TTTTACCGCT TAATTCCCAA AATGGTGGTC CGTTTAAAAA ACCTTGATGA AGTTATTTTT
ACTATTCAGG CCTGCGCTAA GCTTAACCTT CCTTGTACCT TTCGAGCAGC AGGCACCAGT
TTATCAGGTC AAGCGGTATC GGATTCTGTT TTAATTATGC TCACCGATGA TTGGCGCGGT
CACAGTATTC ACAACGATGG CCATAAAATC ACCCTGCAGC CCGGCGTTAT TGGCGCAGAT
GCCAATAAAT ATCTGGCGTC ATTCGGGCGT AAAATAGGCC CGGATCCGGC CTCTATCAAC
ACCTGTAAAA TTGGTGGCAT TGCGGCGAAT AATGCCAGCG GAATGTGTTG CGGGACAGCA
CAAAATACTT ACCGCACCGT TGACAGCATG AAGTTAGTTT TTACGGACGG GACCCTGCTC
GATACGTCGG ACAAAGCCAG TATTGAAGCT TTTGAAATTA AGCAGTCGGC ATTAGTTTCA
GGTATTAAAA AACTCTGTGC TGATGTCAAA AATAATGACG AATTGGCGCA GCGTATCCGC
CATAAATATC GCCTGAAAAA TACCACTGGC TATTCAATCA ATGCCTTAGT TGATTATTCA
GATCCGATCG ATGTGATCAA ACACCTGATG ATAGGTTCTG AAGGTACTTT AGGCTTTATT
GCTGAAATAA CCTATAACAC AGTCATAGAT CACCCGCACA AAGCCTCTGC TTTGATTGTC
TTTAAGGACA TTGAAGAAGC CAGTCAAGCA GTTACCGCTT TAGCAAAAAG TCCCGTCTCC
GCAGTTGAAA TGATGGATGG ACGCGCAATG CGTTCGGTAG CAGATGCAGC CGGCATGCCT
GATTTTATCA AAGACTTGGA TTTAGAAGCC GGTACACTAT TGATTGAATC ACGTGCTGGT
GACAAGGCAA GCTTAGAGCA ACAATGCGCC GCCATTATGC AAACAGCCAG CCAATTTAAA
GTGATTGAAT CGATCGCTTT TACCAGCGAT GCCGAGACTG TCGCCACCCT ATGGGGTATT
CGTAAAGGCA TGTTCCCGGC CGTTGGCGCA GTACGTGAGG TTGGCACTAG CGTTATCATT
GAAGACGTGG CCTTTCCTGT GGAATACTTA GCCGCCGGGG TACGTGATTT ACAGCAGCTT
TTCGATAAGT TTCATTACGA TGAAGCGATT ATTTTTGGCC ATGCGCTGGA AGGTAACCTG
CACTTTGTCT TCACTCAGGG ATTTGACTTA CCCGCTGAAA TCAAACGCTA TGGCGACTTT
ATGGATGCCG TGGCTGAGTT AGTTGCAGTG AAATATCAAG GTTCATTAAA AGCGGAACAT
GGGACAGGCC GTAATATGGC TCCCTATGTT GAGCTTGAAT GGGGTAAAGA TGGCCATGCC
CTGATGCAGC AGATTAAAGC TTTATTTGAT CCCCTGGGCA TATTAAACCC CGGGGTAATT
ATTAATGATG ATCCGCATTC ACACCTTAAA AACCTCAAAC CAATGCCCAA AGCCGATGAT
TTGATTGATC GTTGTATTGA ATGTGGTTTT TGTGAACCGG TCTGCCCTTC ACGCACACTG
TCCCTGTCAC CGCGCCAGCG TATTGTCTTA TATCGCGAAC TGCAACGCCG AGAAGCCGCA
GGCGAAACAG ACAATTTAGA AGAATTCCGT AAGGTCTTTG AATACCAGGG GGTTGATACC
TGTGCCGCTA CCGGCCTGTG CGCCGAGCGC TGCCCGGTCG GTATTAATAC CGGCGATCTG
GTGAAAAAAC TGCGCACCAC TAAATATCAG AAATACAACA CTATTGCCCG CTGGACAGCC
AATCATTTCT CGGCCACCAC CAAGATGGTT AATGTCGGAT TTAAGGTGAA TACACTTGCG
CAGAAAACCC TTGGTGAGGA AGTCGTCGGT AAAGTCACTA ACGGATTGCG CAAGCTAAGC
GCCGGCAAAA CACCCATGTG GATACCTGAA CTGCCGACTT CTAATCCCCA CCAGCCGAAA
AACACTAAGG TCACTAACAA AACAGGAAAT GGTAAAAAGG TTGTTTACTT GCCTTCCTGC
GCCAGTCGCA CCATGGGACA ACAAGCAGGC AATAGTGATG CTCGCCCGCT TACGGAAGTG
ACCACCTCTC TGCTTATCAA AGCCGGCTTT GAAATTATTA TTCCTGACGC TTTGAGCGAC
CAATGCTGTG GTATGCCCTA CGACAGCAAG GGCATGACAG TCATTGCTAA GCAAAAATCA
CAGCAGTTAG AAGATGCACT CTGGCAAGCA AGCGAGCAGG GCAAGTGGCC AATTTTAATG
GATACCAGTC CCTGTGCAAA ATACAGTCTT GAGCAGTTTA CCCAACCGAT GGAAATTTTA
GAGCCCACAG CTTTTGTGCT CAACTATCTG CTCGAATATT TAACACTTTC ACCCGTTAAA
GAAGCAGTGA TGCTTCATAT TACCTGCAGT GCACGACGTA TGGGTCTGGC AGACAGCATG
CTTACACTCG CCAATGCCTG CGCCTCAAAA GTGATTGTAC CTGAGCATAT TGAGTGCTGT
GGTTGGGCGG GTGATAAAGG CTTTACCACG CCTGAACTCA ATGCAGCAGC ACTGCAGACA
CTCAAAGAGC AAGTACCGGA CAACTGCTCG CGCGGCTTCA GCAATAGCCG CACCTGTGAG
ATAGGTTTAT CCCACCATAG CGGCATTCCT TATCAGTCTA TTTTGTATTT GGTCGATGAG
GTGAGCGCTT AG
|
|---|
| Protein sequence | MENNDQHNYQ QLQDLLTTKI NHERIFTEEA LLLAYGTDAS FYRLIPKMVV RLKNLDEVIF
TIQACAKLNL PCTFRAAGTS LSGQAVSDSV LIMLTDDWRG HSIHNDGHKI TLQPGVIGAD
ANKYLASFGR KIGPDPASIN TCKIGGIAAN NASGMCCGTA QNTYRTVDSM KLVFTDGTLL
DTSDKASIEA FEIKQSALVS GIKKLCADVK NNDELAQRIR HKYRLKNTTG YSINALVDYS
DPIDVIKHLM IGSEGTLGFI AEITYNTVID HPHKASALIV FKDIEEASQA VTALAKSPVS
AVEMMDGRAM RSVADAAGMP DFIKDLDLEA GTLLIESRAG DKASLEQQCA AIMQTASQFK
VIESIAFTSD AETVATLWGI RKGMFPAVGA VREVGTSVII EDVAFPVEYL AAGVRDLQQL
FDKFHYDEAI IFGHALEGNL HFVFTQGFDL PAEIKRYGDF MDAVAELVAV KYQGSLKAEH
GTGRNMAPYV ELEWGKDGHA LMQQIKALFD PLGILNPGVI INDDPHSHLK NLKPMPKADD
LIDRCIECGF CEPVCPSRTL SLSPRQRIVL YRELQRREAA GETDNLEEFR KVFEYQGVDT
CAATGLCAER CPVGINTGDL VKKLRTTKYQ KYNTIARWTA NHFSATTKMV NVGFKVNTLA
QKTLGEEVVG KVTNGLRKLS AGKTPMWIPE LPTSNPHQPK NTKVTNKTGN GKKVVYLPSC
ASRTMGQQAG NSDARPLTEV TTSLLIKAGF EIIIPDALSD QCCGMPYDSK GMTVIAKQKS
QQLEDALWQA SEQGKWPILM DTSPCAKYSL EQFTQPMEIL EPTAFVLNYL LEYLTLSPVK
EAVMLHITCS ARRMGLADSM LTLANACASK VIVPEHIECC GWAGDKGFTT PELNAAALQT
LKEQVPDNCS RGFSNSRTCE IGLSHHSGIP YQSILYLVDE VSA
|
|---|
| |