Gene Ping_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1417 
Symbol 
ID4626969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1738636 
End bp1740162 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content39% 
IMG OID639796623 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_942833 
Protein GI119945153 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCCA ATCATGTTGA AGTCAGGCAT TTAACCAAGC AGGATATGCA GGAACTGCAA 
AATGCCTGTG CAGATGTATA CCACATAGAC AAACTTAATA CTTGGGATGA ATATGCTATA
GATACCCTGT TAAGCCGTTT TCCCGATGGG CAAATATGTG TTTGTGTGGA CGGTAAAGTG
GTCGGTTGTG CTTTGTCATT AATCATTGAT TACGCAAAAT TTGGCGATGA TCATACTTAT
AATGAAATCA CCTCAAATAT GACTTTTACT AAGCATGATC CGGATGGGGA TGTTCTATAT
GGTATTGAAG TGTTTATTCA TCCTGACTAT CGGGGATTAA GACTGGCACG TCGTTTATAT
GTGGCAAGAA AAGAGTTATG TGAAAATCTT AATTTGCGTT CCATTATGGC GGGTGGTCGT
ATGCCCAATT ATTCAAAATT TGCGGATCAA TTCACTGCCA AACAATATAT AACCAAAGTA
AAAGAAAAAG AAATTTATGA TCCGGTATTA AGTTTTCAAT TAGCCAATGA TTTTTTTGTG
CGTAAGCTGC TCAAAAATTA CCTTGCCGGT GATGTTGAGT CAATGGAATA TGCCACCTTA
TTAGAATGGC CAAATATTTA TTATACCCGT TCAGTTAAAC TGATTAATGC ACCTAAAACA
GAAGTGCGTA TTGGTTTAGT ACAATGGCAA ATGCGCAGCA TGGCCGATTT GAATGATCTC
TATGAACAAA TTGAATTTTT TGTGGATGCG GTATCGGATT ATGAAAGTGA CTTTATTCTT
TTTCCGGAAC TGTTTAACGC ACCTCTGATG GCCCAATTCC ATCATTTAAA TATTCCGGAA
ACTATCCGTA AGTTAGCGGA TTATACTATT CCGATTCGTG ATAAATTTAT TGAGTTTGCT
ATTACCTACA ATATCAATAT TATCACCGGC AGCATGCCCT ATGTGGTTGA CGACAAGCTC
TATAATTCCG GGTTTTTATG CCGCCGGGAC GGGACTTGGG AGCGTTATGA TAAATTACAC
GTCACCCCTT CAGAAAAAAG AAATTGGATA ATGACCGGAG GGGATAAGAT TGAAGTCTTT
GATACCGACT GTGGCAAAGT GGGGATTATG ATCTGCTACG ATGTTGAATT TCCAGAATAT
GTGCGTTTAT TGGCTGATCA AGGTATGAAT ATCTTATTTG TGCCCTTTTT AACTGATACT
CAAAATGGTT ACACTCGTGT GCGTCATTGT GCCATGGCAC GTGCGATTGA AAATGAGTGT
TATGTGGCTA TTGCAGGGGC GGTCGGTAAC CTTGCCCGGG TCAATAATAT GGATATTCAG
TATGCGCAAT CTGCATTGTT TACGCCTTCT GATTTTGCAT TTCCAACCAC AGGTATTAAA
GCGGAAGCAA CCCCTAACTC TGAAATGAGC TTAATTGTGG ATGTTAATTT AGATCTCTTA
AAAGCATTAC ATAACCACGG CAGTGTGCAT GCGATGAAAG ATCGCCGCCA TGATCTGTAT
TCGCTTAAAC GTATAGATAA ACAATGA
 
Protein sequence
MEANHVEVRH LTKQDMQELQ NACADVYHID KLNTWDEYAI DTLLSRFPDG QICVCVDGKV 
VGCALSLIID YAKFGDDHTY NEITSNMTFT KHDPDGDVLY GIEVFIHPDY RGLRLARRLY
VARKELCENL NLRSIMAGGR MPNYSKFADQ FTAKQYITKV KEKEIYDPVL SFQLANDFFV
RKLLKNYLAG DVESMEYATL LEWPNIYYTR SVKLINAPKT EVRIGLVQWQ MRSMADLNDL
YEQIEFFVDA VSDYESDFIL FPELFNAPLM AQFHHLNIPE TIRKLADYTI PIRDKFIEFA
ITYNINIITG SMPYVVDDKL YNSGFLCRRD GTWERYDKLH VTPSEKRNWI MTGGDKIEVF
DTDCGKVGIM ICYDVEFPEY VRLLADQGMN ILFVPFLTDT QNGYTRVRHC AMARAIENEC
YVAIAGAVGN LARVNNMDIQ YAQSALFTPS DFAFPTTGIK AEATPNSEMS LIVDVNLDLL
KALHNHGSVH AMKDRRHDLY SLKRIDKQ