Gene Ping_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1392 
Symbol 
ID4623807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1709345 
End bp1710736 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content45% 
IMG OID639796599 
Productnucleoside recognition domain-containing protein 
Protein accessionYP_942809 
Protein GI119945129 
COG category[S] Function unknown 
COG ID[COG3314] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGACA AAGTAATTCC AACAGTAATG CCAGAAGTAA CAGCAAAAAA ATCGCATAAT 
CTGGCGACGA TATTAACCTT TATTGTGCCT TCATTAATCG GCCTTTTACT ATTTATGACA
CCGGTTAATT ATCAGGGTGA CATTACTATC CCCATTGCCA TTGTGGCTAA AGGTCTGCTG
ATCCTGCTTG GTGATTCAGC AACAGCCGTG GTAACCGGTG TTGTGCTCTT TACAGCTGCG
ATGACGCTGA TTAATAAAGT TATAAAGATC CCCTTTATTC AAGACAGTGA TTTTTTAAAA
AGCTTATTAG ATGTTTCACC CGTATGGTTT ATTATCCGCC TGCTGGGTGC CCTCTTTATT
GTGATGACTT TCTTTAGCAT CGGCCCTGAA GCCATTTATT CTGGCAATAC CGGTGCACTG
GTTTTAAACG ATCTGCTGCC AATGCTCTTT TGTGTGTTTA TTTTTGCTGG GATGTTACTA
CCGCTTTTAT TGAACTTTGG GATGCTTGAG CTGTTCGGCA CCTTATTAAC CAAAGTAATG
CGCCCGGTAT TTAATCTTCC AGGTCGCAGT GCGATTGACT GCATGGCATC TTGGTTAGGC
GACGGCAGTG TTGGCATTTT ACTGACCAGC AAACAGTATG AAGCGCGTTT TTACACCCAG
CGTGAAGCGG TGGTTATCGG GACAACCTTC TCGGCGGTTT CTATTACTTT CTCTCTGGTA
GTGCTCTCAC AGGTGGGACT TGAACATTTA TTTGTCCCTT TTTATCTGGC GGTGTGTATT
GCCGGTGTTG TGGCGGCCAT TGTGGTGCCA AAATTACCGC CCCTTTCCTG GAAGAAAGAC
CGCTATATTG ATGGCAGTGC GCAATCCGCC GATGATGAGT TAACACCTGC CGGGCATAAT
GTTTTCTCAT GGGGGTTGGA GCATGCATTA AACAGAGCGG AAAAGACCCC TGGTGTTAAG
GCGACTTGTA CGGATGGGCT TAAGAATGTT ATTGATATGG TCTTTGGGGT TATTCCGGTG
ATCATGGCCA TTGGTACAAT GGCGCTGATT GTTGTTGAAT ACACGCCTAT TTTTGAGTAC
TTAGGTTATC CCTTTATTCC TTTTCTGGAG TTGCTGCAGA TTCCACAAGC CGCTGAAGCA
TCCAAAACCA TTGTGGTTGG TTTTGCCGAT ATGTTTATTC CCTCAATTCT TGCGGCTTCC
ATCGAATCTG AGTTGACCCG TTTTGTTATT GCGGCCATGT CCGTTACCCA GCTTATCTAT
ATGAGTGAAA TTGGTGCGTT AATGCTGGGC AGTAAGATCC CAATAAATGT TGCCGAGCTC
TTTGTGGTTT TCATTTTAAG AACCTTAGTG ACGTTACCGG TGATTGCCGG TATTGCGCAC
CTGATTTTTT AA
 
Protein sequence
MTDKVIPTVM PEVTAKKSHN LATILTFIVP SLIGLLLFMT PVNYQGDITI PIAIVAKGLL 
ILLGDSATAV VTGVVLFTAA MTLINKVIKI PFIQDSDFLK SLLDVSPVWF IIRLLGALFI
VMTFFSIGPE AIYSGNTGAL VLNDLLPMLF CVFIFAGMLL PLLLNFGMLE LFGTLLTKVM
RPVFNLPGRS AIDCMASWLG DGSVGILLTS KQYEARFYTQ REAVVIGTTF SAVSITFSLV
VLSQVGLEHL FVPFYLAVCI AGVVAAIVVP KLPPLSWKKD RYIDGSAQSA DDELTPAGHN
VFSWGLEHAL NRAEKTPGVK ATCTDGLKNV IDMVFGVIPV IMAIGTMALI VVEYTPIFEY
LGYPFIPFLE LLQIPQAAEA SKTIVVGFAD MFIPSILAAS IESELTRFVI AAMSVTQLIY
MSEIGALMLG SKIPINVAEL FVVFILRTLV TLPVIAGIAH LIF