| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1369 |
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| Symbol | |
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| ID | 4624062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1686227 |
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| End bp | 1687693 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639796579 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_942789 |
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| Protein GI | 119945109 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.271399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTTACT TTTTAGTTTT AATTGTTGGT TTATTTTTGG GGATCGTCGC TACCAAGAAT
CAGCAAATCA ATAGTTTGTT TAGTGCAACA CAAAAAACAG CAGAGCCGGA AGTTTTATAT
TGGGTTGCCC CAATGGATGC AAATTATCAG CGTGATAAAC CGGGTAAATC CCCGATGGGC
ATGGATTTAG TGCCTGTTTA TGCAGAAAAA AGTGCTGAAG CTGAAAAAGC TGAGCCTAAA
ATTTTATATT GGGTTGCCCC GATGGATGCG AATTATCAGC GTGATAAACC GGGTAAGTCC
CCGATGGGCA TGGACTTAGT CCCTGTCTTT GAGGAAGCAG GAGGCGAGTC TGAAGCGGGC
TTAGTTAAAA TCTCACCGGC GGTTGAAAAT AATCTTGGCG TACGTACAGG AAAGGTGGTT
AATGCACCGT TAAATATCTC CATCAACACA TTAGGAACAG TACAGGCCAA TGAGAATGCG
CTGTGGCAAA TCAATAGCCG AGTCTCGGGA TGGATTGAAA AACTTTATGT TAAATCCGTG
GGCGTTGAAG TTGAAAAAGG GCAAGCGCTG TTTGATCTTT ATTCCCCAGA GTTAGTGAAA
GCACAGGAAT CATTATTTAA TGCGATTAAT TTAAATCGTA GCAATTTAAT TACTTCGTCA
AAAGCGCGTT TACAGGCATT AGGGGTAAAT CAGGATCAAA TTGAAAATAT AATCAGAAAT
AAAAAAGTAT TACAAAATAT CACCGTCTTC GCACCGCAAA AAGGCACTAT TTCGGAGCTT
AAATTAAATG AAGGGGCGTT TATTTCGCCT TCTACTGTGG TGATCACTGC GGTTAATTTA
GATACGGTTT GGGTGGACGT TGAAGTGTTT GCCGCACAAG TATCATTAGT TAAGCTCGGC
GATTTAGCAT CTATGACCTT AGATTATTTT CCGGGACAGA AATGGGAAGG GCAGGTTGAT
TTTATCTACC CTGAAATGAA CGCCAGTAAT CGTACCCTGA GGGTTCGTCT GCAATTTGAT
AATCCCACTG CATTATTAAA ACCTAATATG TTTGCCAGTG TCACACTGAT CCCGCAAATG
AAGCAAAGAA CACTGCAAAT TCCTCGGGAA GCGGTAATTT ATGCCGGTAA CATGAATCGC
GTCGTATTAG CCTTAGGTGA GGGTAATTTT AAGTCTGTGC TGGTTAATTT AGGGCTGGAA
AACAAAAAAT CGGTGGAAGT TTTGTCGGGT TTAAGTGAAG GGCAGGAAAT AGTCACCTCG
GCGCAATTTC TATTAGATTC AGAGTCCAGC ATCAGTGCAG ATTTTGGGCG AATGTTAGAG
CTTGATAAAA ACAAACAAAG TCAGCCTGAG TCCGATTCAA TCGGTGAAGA TGAAGATCTC
GATTGGCTTG ATTTAGGTGA GCAGTCTGAT TTTGGTTTAT CAGGAAACAA CACTTCAGGA
CCCGTTGCTC GGAAGGTGAC ATTATGA
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| Protein sequence | MRYFLVLIVG LFLGIVATKN QQINSLFSAT QKTAEPEVLY WVAPMDANYQ RDKPGKSPMG
MDLVPVYAEK SAEAEKAEPK ILYWVAPMDA NYQRDKPGKS PMGMDLVPVF EEAGGESEAG
LVKISPAVEN NLGVRTGKVV NAPLNISINT LGTVQANENA LWQINSRVSG WIEKLYVKSV
GVEVEKGQAL FDLYSPELVK AQESLFNAIN LNRSNLITSS KARLQALGVN QDQIENIIRN
KKVLQNITVF APQKGTISEL KLNEGAFISP STVVITAVNL DTVWVDVEVF AAQVSLVKLG
DLASMTLDYF PGQKWEGQVD FIYPEMNASN RTLRVRLQFD NPTALLKPNM FASVTLIPQM
KQRTLQIPRE AVIYAGNMNR VVLALGEGNF KSVLVNLGLE NKKSVEVLSG LSEGQEIVTS
AQFLLDSESS ISADFGRMLE LDKNKQSQPE SDSIGEDEDL DWLDLGEQSD FGLSGNNTSG
PVARKVTL
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