Gene Ping_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1366 
Symbol 
ID4624059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1682538 
End bp1683500 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content48% 
IMG OID639796576 
ProductNa+/Ca+ antiporter, CaCA family protein 
Protein accessionYP_942786 
Protein GI119945106 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATA TTTTATTTCT TTTAGCGGGT ATAGCCTCAC TTACCTGTGG CGGTGAAATA 
TTGATTCGTG GCTCGCTGGC TGCCGCAAAA CGCTTGGGTG TGTCACCTTT GCTAAGCGGT
CTAGTTATCG TCGGATTCGG CACTTCAGCG CCAGAGTTAG TGGTCTCCGT TAATGCTGCT
ATAGAGGGGC AACCGGACAT CGCTATTGGC AACGTTGTTG GCAGCAATAT CGGTAATATT
TTATTGATTC TGGGCATTTG CGCGGTGATC ACGCCGCTGG CTGTAAAGCC ATTGGTACTA
AGGCGAGACG CTGCCACTGT AGTGGCTGCA AGCATATTGT TTCTGATTCT GGTTGGGGGG
AGTGCCCTTG GGCGTGCTGA TGCCACTATC TTCCTTGTTG CAATGGTCTC GTACTTAGTG
TGGGCATATT GGAGCGAACG CTTTCACGCC GCACCGTCGG GTGAGCTATA CCAAGCTGAA
GCAGAAGAAC TTTCTGCCAC TCCTAAGTCA GTATTATGGA CTATAATCGC CGTGGTGCTT
GGTTTGTTGC TGTTAATTGG AGGATCACAA GTTCTGCTGA TTGGGGCCAT TGGTATTGCA
GAGCACTTTA ATGTGCCAGA GGCCGTCATC GGCCTGACAT TGGTTGCAAT AGGTACGTCA
CTTCCTGAAT TGTCTATATC GGTGATAGCA GCTATTCGGC GGCACGCTGA TGTAGCGGTT
GGAAATATAC TCGGAAGTAA TATATTCAAC TTACTTGGAA TTCTGGGAGT GTCATCATTT
CTTCAACCAC TTCCTGTTCA TGCAAGAATC TTGCAGTTCG ATCAATGGGT TATGCTTGGA
ACGTCTTTAC TCTTGTTTTT ATTTTTGTAC ACGGGAAGCC GCCTGAGCCG GCTAGAAGGC
GGAATACTAC TTGGCGGGTA CTGTATCTAT ATCTGGCTAA GTTTTACGGT GTTCAGTGGT
TAA
 
Protein sequence
MLNILFLLAG IASLTCGGEI LIRGSLAAAK RLGVSPLLSG LVIVGFGTSA PELVVSVNAA 
IEGQPDIAIG NVVGSNIGNI LLILGICAVI TPLAVKPLVL RRDAATVVAA SILFLILVGG
SALGRADATI FLVAMVSYLV WAYWSERFHA APSGELYQAE AEELSATPKS VLWTIIAVVL
GLLLLIGGSQ VLLIGAIGIA EHFNVPEAVI GLTLVAIGTS LPELSISVIA AIRRHADVAV
GNILGSNIFN LLGILGVSSF LQPLPVHARI LQFDQWVMLG TSLLLFLFLY TGSRLSRLEG
GILLGGYCIY IWLSFTVFSG