Gene Ping_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1342 
Symbol 
ID4624511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1663980 
End bp1665059 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content43% 
IMG OID639796556 
ProductDNA polymerase IV 
Protein accessionYP_942766 
Protein GI119945086 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTGATC TTCCCCTCCC TCGGCAACGC AAAATTATCC ATATTGACAT GGATTCATTT 
TTTGCATCGG TGGAGATGCG AGACGAACCA AGCTATAGAG GGATTCCTCT TGCAGTTGGA
GGGAGTGAGC TTCAGCGCGG GGTGATTAGC ACATCTAACT ATGAGGCTCG TAAATATGGT
GTGCGTTCTG CAATGGCAAC TGCTCATGCC TTGAGATTGT GTCCACACTT AACCGTGGTT
CCTGGTCGAA TACAGGTTTA TAAAGAGATT TCAGCGCAAA TTAGAGCTAT TTTTGAGCGT
TACACTCACT TAATCGAACC TTTATCTTTA GATGAAGCTT TTCTTGATGT CACTGAATGC
TGCCAATTAC ACGGCTCTGC AACACTTATT GCTGAAGCAA TAAGAAATGA TATCCGTAGG
GAGTTGAATC TTACTGCTTC AGCTGGTGTT GCACCGATTA AGTTTTTAGC TAAAGTCGCT
TCTGATATGA ATAAACCGGA TGGTCAGTTT GTGATCCCTC CGGATAAGGT ACAGAGCGTA
ATCGATACTC TACCACTGGA GAAAATCCCT GGTGTTGGTA AGGTAAGCTT GCAAAAGCTT
AATAATGCAG AGTTTTATGC CTGTGCGGAT ATTAAAAACA GCAATTATTA TGAATTACTT
AGACGGTTCG GTCGTATGGG CGAGGCACTC TGGAATTTTA GCCATGGCAT CGACAATCGC
GAAGTAGTTA CTGAGCGAGA ACGTAAGTCC GTCGGAGTAG AGCGTACATT TTCAATTAAT
ATCACTACCT TTGAGGAATG CTGGCTGTTC ATCGAACGGA AGCTCTTTCC TGAGCTAGAT
AAACGACTTG GGCATGCTAC TCCGGAGCGT TCGATCATCA AACAGGGGAT CAAGATGAAG
TTTGCTGATT TTCAACTTAC CACAATAGAG CATGGACATC ACGAATTGGA GCTGGAATAT
TTCCGTGAAC TATTGTGTGA AATTATCAAA AGACAGAATG GCAGAGAGAT AAGGCTCCTC
GGTCTAAGTG TGGTTTTAAA ACCTGAAGGG CAAGTAAAAC AGCTGAGCTT GGACTTATAA
 
Protein sequence
MSDLPLPRQR KIIHIDMDSF FASVEMRDEP SYRGIPLAVG GSELQRGVIS TSNYEARKYG 
VRSAMATAHA LRLCPHLTVV PGRIQVYKEI SAQIRAIFER YTHLIEPLSL DEAFLDVTEC
CQLHGSATLI AEAIRNDIRR ELNLTASAGV APIKFLAKVA SDMNKPDGQF VIPPDKVQSV
IDTLPLEKIP GVGKVSLQKL NNAEFYACAD IKNSNYYELL RRFGRMGEAL WNFSHGIDNR
EVVTERERKS VGVERTFSIN ITTFEECWLF IERKLFPELD KRLGHATPER SIIKQGIKMK
FADFQLTTIE HGHHELELEY FRELLCEIIK RQNGREIRLL GLSVVLKPEG QVKQLSLDL