Gene Ping_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1333 
Symbol 
ID4626446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1651402 
End bp1652040 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content43% 
IMG OID639796547 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_942757 
Protein GI119945077 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATAT TAAATTTTGA AGCCTTTTTA ATCGCGATAA CGATTCTCAC TTTAACACCG 
GGTTTAGATA CTGCGCTGGT TATTCGCAAT GCTAGCCGTT CGGGGGGAAT CGACGGTTGT
GTGACCAGTT TGGGGATCTG CCTGGGGCTG TTTGTCCACG CGACATTATC AGCTGTGGGT
ATTTCAGCTA TTTTGCTGCA ATCAGCACAA CTGTTTCAGG TTATGAAGTG GTGTGGAGCA
GCGTATTTAA TTTGGCTGGG CTTAAGTAGC CTTAGGGCCA CCTTTAAAGG TGCAAGCCAT
CTCAATATAA GCACCTGCAC TGGGGTTACA TTTGATCCCA AACGCTCCCT TCGTGAAGGT
TTTTTATCTA ATGTACTTAA CCCCAAAACA GCTATTTTCT ACCTTGCTTT TTTACCGCAA
TTTATTAATC CCGATTACTC CCCCTTTGTA CAGTCACTTA CCTTGGCGGG TATTCATTTT
TTAATTGCGA TGGTCTGGCA ATGCAGCTTG TCCGGCGCAA TTAATTCTGC TAAAAACTGG
TTAAAAAACA CTTCTATTAT GACTTGGATG GAGGGTGTGA CCGGCACTGT ATTGATTCTC
CTGGGCATAA AATTATTAAT GGATGACTCA GTCGTTTAG
 
Protein sequence
MHILNFEAFL IAITILTLTP GLDTALVIRN ASRSGGIDGC VTSLGICLGL FVHATLSAVG 
ISAILLQSAQ LFQVMKWCGA AYLIWLGLSS LRATFKGASH LNISTCTGVT FDPKRSLREG
FLSNVLNPKT AIFYLAFLPQ FINPDYSPFV QSLTLAGIHF LIAMVWQCSL SGAINSAKNW
LKNTSIMTWM EGVTGTVLIL LGIKLLMDDS VV