Gene Ping_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1332 
Symbol 
ID4626445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1650089 
End bp1650988 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content44% 
IMG OID639796546 
ProductROK family protein 
Protein accessionYP_942756 
Protein GI119945076 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTATG GTTTAGACAT TGGGGGCACT AAGATTGAGA TTGTGGTCTT TGACCAAGAT 
TTTAGAGTGA TAAATACCGC CAGAATAGAC ACCCCAAGTG ATAATTATCT GCATTTTATT
CAAACAGTTT GCCAACTGGT AAGGCAAAGA GACAGGCAAT ATTCCTGTAT TGGCAGTGTT
GGTATCGGTC TGCCCGGTGT CCAGGAAACC CGGTCATTGA AGCAGATATC TTCAAATATT
CCCTGCTTAA CCGGGCAGCA TGTCGCCTAT GACTTGGCAA AAGAGCTCAA TCGGACGGTA
CATATTGATA ATGATAGCCG CTGTTTTGCG CTTTGTGAGG CATTGACAGG TGCGGGTAAG
GGGAACGCCA GAGTATTTGC TGCTGTATTA GGAACCGGCG TGGGCGGCGG ATTAGTGCTT
GACGGTAAAT TGTATCGTGG AGCAAGCGGA ATTGCTGGTG AATGGGGGCA TATGCCGATT
TCTGCCCATT TAGTCAACCA ATATGGACTG TTTGTAAAAC AGTGTAATTG CGGTCTTTAT
GGCTGTTTAG AGCATTACAT TTCAGGCACG GGATTAAGCA ATCTTTGCCA ATATTTTTTA
GGGGAAGCGC TGCAGGCTGA GCAATTTTTA AAACGAGTCG CAGACAAAGA CGCGCAAGCG
CTGCATGTCT ATCAAGTATT TATTGATATT TTATGCACTG GTTTTGCAAA CCTGCAATTG
ACCTATGATG TTGATATTAT TGTTCTTGGC GGTGGTTTAT CCAATATTAA ACGTCTTTAT
GCCGATCTTC AGCAGCGTTT ACCCTATTTT TTATTTAAAG GGATTCAAGC TGTGCCTATT
GTCCAAGCAC AATTTGGTGA TAGCAGTGGG GTACGCGGAG CGGCTTTATT GGCCAATTGA
 
Protein sequence
MRYGLDIGGT KIEIVVFDQD FRVINTARID TPSDNYLHFI QTVCQLVRQR DRQYSCIGSV 
GIGLPGVQET RSLKQISSNI PCLTGQHVAY DLAKELNRTV HIDNDSRCFA LCEALTGAGK
GNARVFAAVL GTGVGGGLVL DGKLYRGASG IAGEWGHMPI SAHLVNQYGL FVKQCNCGLY
GCLEHYISGT GLSNLCQYFL GEALQAEQFL KRVADKDAQA LHVYQVFIDI LCTGFANLQL
TYDVDIIVLG GGLSNIKRLY ADLQQRLPYF LFKGIQAVPI VQAQFGDSSG VRGAALLAN