Gene Ping_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1319 
Symbol 
ID4626432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1639134 
End bp1639943 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content40% 
IMG OID639796533 
Productexodeoxyribonuclease III 
Protein accessionYP_942743 
Protein GI119945063 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTA TCTCGTTCAA CATCAATGGG CTGCGAGCTC GTCTCCACCA ACTGCAAGCT 
ATTATTGATA AACACCAACC CGATGTCATT GGATTGCAGG AAATCAAGGT TCATAACGAT
GTTTTCCCTG TTGCTGATGT TGAAGCGATG GGATACCACG TCTATTTTCA TGGGCAAAAA
GGCCATTACG GTGTGGCAAT GCTTTGTAAA AATAAAGCCC TCGATGTGCA ATATGGTTTT
CCTACGGACG ATGAAGAAGC GCAGCGCCGC ATGATCATGG TAACAGTGCA GGATAAAGCG
GGTTTACCTG TGCGCATCCT CAATGGTTAT TTCCCCCAGG GAGAGAGCCA AAATCACGAA
ACCAAGTACC CTGCAAAACG TAAGTTTTAT CAAGATTTAA ATATTTATCT CAATGAGTAC
CACACTGCAG AGGACCAACT GATTGTAATG GGAGATATTA ATATTTCCCG GCTTGATTTG
GATATCGGCA TTGGTGAAGT AAATGCAAAA CGCTGGTTAC AAACAAAAAA ATGTAGTTTT
TTGCCAGAAG AGCGTGAATG GTTAGCTAAA TTGATGGATT TTGGTCTTAT AGATACCTTT
AGGTTATTAA ACCCCGAAGT ATCTGACCAA TATAGCTGGT TTGATTATCG CTCTCGTGGG
TTTGATGATA ATAGAGGCTT ACGTATAGAT GTTATTTTAG CCACGGAAAC ATTGGCAAAT
AAGACCATTG ATACCGGTAT AGATTATGAA TTAAGAGCTA TCGAAAAACC TTCTGATCAT
GCTCCAATAT GGACAGAGTT TGCTAATTAA
 
Protein sequence
MKVISFNING LRARLHQLQA IIDKHQPDVI GLQEIKVHND VFPVADVEAM GYHVYFHGQK 
GHYGVAMLCK NKALDVQYGF PTDDEEAQRR MIMVTVQDKA GLPVRILNGY FPQGESQNHE
TKYPAKRKFY QDLNIYLNEY HTAEDQLIVM GDINISRLDL DIGIGEVNAK RWLQTKKCSF
LPEEREWLAK LMDFGLIDTF RLLNPEVSDQ YSWFDYRSRG FDDNRGLRID VILATETLAN
KTIDTGIDYE LRAIEKPSDH APIWTEFAN