Gene Ping_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1307 
Symbol 
ID4625839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1623139 
End bp1624194 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content43% 
IMG OID639796522 
Productantifreeze protein type I 
Protein accessionYP_942732 
Protein GI119945052 
COG category[S] Function unknown 
COG ID[COG4260] Putative virion core protein (lumpy skin disease virus) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.833399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCA TTGATCGTGT CAAATACAAT GGTCCCGGTG ATGTTTTTGC CTGGCGTTGG 
CCCCATGACA GTCTAGTATG GGGGACACAG GTTATTGTTA ACCAGGCACA AGAGGCGGTC
TTTTATAAAG ACGGCAAAGC ACTTGATGTA CTCGGCCCGG GCCGCCACAC ACTAAAGTCT
GCGAATATTC CGTTATTAGA ACATCTGGTT AATATCTCTT TTGATAACCA GTCCCCCTTT
GCTGCAGAAA TTTATTACGT TAATAAAGCC GTTAATCTAA ATATGAAATG GGGTACGCAG
GAGCCAATCC CGATTCTAGA GCCTGTTTAT AATATTTACA TCCCGTTGCG GGCATTCGGA
CAGTTCGGCA TAAAAATTAC CGATGCAAAA AAGTTTGTTA CTACGCTAGT GGGAACCGTT
GACGAGTTCG ATGCAGAGCA AATTCTTAAC TATTTTCGTG GCCATCTAAT GAGCCGGATA
AAAGACTTTA TTTCTAAAAA AGTCATTAAC GATAGAATAT CAGTGCTTAA TATCAGTGCG
CATCTTAATG AAATGTCAGC GGCCCTGCAG AACGATATCA TGGCTGAATT TAAGCGTTTC
GGTATTGAAA TTGTAAACTT TTATTTGAAT TCGATAAACG TGCCACAGAA TGATGACAGC
GTAATACGTT TAAAAGAGAT ACTGGCGAAA AAAGCGGAAT TTGATATTTA CGGTGAAACC
TATAACACCG TTAAAATGTT TGATGTAGCG GAAAAAGCAG CTTCAAATGA AGGTGCGGGT
GGTGTTGCCG GCGCAGGTGT CGGCATGGGA GTGGGTTTCG GGATAGGCAA TCAGATGATG
AAGTTGAATT CAACATCAAT GGAAAATGAA CAAAGCACCA TTATGGCAGG CCCGTCTTGT
TCGTCTTGTC AACAGACTAT TCCGCAGGGA GCAAAATTCT GCCCCAGCTG CGGCAGCGAA
CAAGTACAAG CACAGGTAAA AAAATTCTGT GTGGACTGTG GCACAGAAAG ATCATTAGAT
GCCAAATTCT GTCCCGGCTG CGGTAAAAAA CAATAA
 
Protein sequence
MNIIDRVKYN GPGDVFAWRW PHDSLVWGTQ VIVNQAQEAV FYKDGKALDV LGPGRHTLKS 
ANIPLLEHLV NISFDNQSPF AAEIYYVNKA VNLNMKWGTQ EPIPILEPVY NIYIPLRAFG
QFGIKITDAK KFVTTLVGTV DEFDAEQILN YFRGHLMSRI KDFISKKVIN DRISVLNISA
HLNEMSAALQ NDIMAEFKRF GIEIVNFYLN SINVPQNDDS VIRLKEILAK KAEFDIYGET
YNTVKMFDVA EKAASNEGAG GVAGAGVGMG VGFGIGNQMM KLNSTSMENE QSTIMAGPSC
SSCQQTIPQG AKFCPSCGSE QVQAQVKKFC VDCGTERSLD AKFCPGCGKK Q