Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1303 |
Symbol | |
ID | 4625835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1614435 |
End bp | 1618139 |
Gene Length | 3705 bp |
Protein Length | 1234 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639796519 |
Product | SMC domain-containing protein |
Protein accession | YP_942729 |
Protein GI | 119945049 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAT TATCTATTCG TTTTAAAAAT CTAAATTCAT TAAAAGGCCA TTGGAAAATT GATTTTCAGG ATGCTGATTT TTTAGAAAAC GGTCTGTTTG TTATTACCGG ACAAACAGGT GCAGGCAAAA GCACTATTCT GGATGCTATC TGTTTAGCCT TATATCAGCA GACCCCACGT TTAGACAGGA TCACTCAAAG TAAAAATGAA TTAATGACTC GCGGAACGTG GGAGTGTTCA GCGGAAGTGG AATTTAGTGT TAAGGGAAAG GGCTACCGTG TTTTTTGGGA ACAAAAAAGA GCCAGAAAAA GTGCTGCCGG GAAACTGCAG GCGCCTATCT GTGAATTAAG CTTGATTGAA GGCGATGTAC TTTGCACTAA AAGCAGTGAA GTATTAAAGC AGGTTATTGA GCTTACCGGA CTCGATTTTT CCCGTTTTAC AAAATCTATG CTGCTGGCGC AGGGCGGTTT TGCCGCGTTT TTAAACGCCA GCCCGAGAGA TCGTGCCGAA TTATTAGAAG AGTTAACTGG GACTGAGATT TATTGTGAAA TCGCTAAACA CGTGTTTGAA CGTAATAAAC AGGCTCAGGC GGAATTAGAT TTATTAATCA AACAAGCGGA TGTATTAGAA GTACTGTCAG AAGAGCAGGT TGATGAGTTA AATAAGCAAG TTCAGCTCCT TGCCGCCGAT AAACAGACAG TACAAACAGA CTTAAAGGAT CTTGAAGGCG CTTTATTGTG GCTGAAAAAC GCACAAGTAT TAAAAGAACA GGTAGAAGCG CAGTTGAGAC TGTTAACAAA CGCGCAGCAG TCTGCCGCTG AGTTTAAGAA TAAACAGCAG CAGATTGAAC TTGCACAGCA GGCTAAACGG CTGGAACAGC CGTATCAGAA TCAGTTGTTA AACGCAGAGA AGATCCAGTC TGGCGAGACG TTGCTAGTTG AAAATGAACA AAAAAACAAA ATATTACAAG CGCAGCTAAT AGAGTGCAAA AACGGGGCTG AAAGCCTCAC TGCAGCGCAG AAATCTCTAC AAGAAAGCCA TGCTGTCCGG CATAATAAAA TCAATGAACA TCTTATGCCT TTAGATTTGG CAATAGGTCA GTTAACAGGC CTATGCGGTG AACAACAATT GGCCGTCGAC AAACAGATAA ATACAGCCGT TGAAACGCAG CAGACGCTGA ATATTCGCTT AGCCCAACAA AAGACTGATA ATCTTGCCTT AAAAACGTTA AATGAGGGTT TACAGAAGCA GCAGGCTGCG CATCATCTTC AGGAAAGTTT GCCGCTTATT GAGCAGCAGT TTTCTTTCTA TATTAAGCAG CAGTCGCAAT TAAAAGACTC TTTGTCTGGC AGTTCTGAGT TGCAGAAAAA ACAAAGCGTG TTGCACAATG ACCTGCTGGA TGTGCATAAG CAGGTCAAGC TCAGCGCACA AGCGCTGCAT GAAAAGCAGC TGCTACTGCA ACAAGTTCAG CAGCACCGAG AGTCATTATT GGACAGTGGT CAATTTAGCA GTGCCGGGCA AATGAATATA ATACTGACCG AGGTCTTTGA TCAACAGTCT CAAAACCAAC AGGCTTTATC TTTAACAAGG CAGCTAGATG ATAGTTATGC AAGGTTAGCC GCTGTACACA AAGGCAGTGC TGAATTAGAG CAAAGCATTA AAGGCAATCA GCAGGCATTA ATGGTGAGTG AGCAGCAAGG ACTAGAGTGC AAAAATTCGC TGCTTGCACT GCAAAAGCTG TTAAAACAAG AGCAGGTGAT TGCCCAATTG AGTGATTTAA AAAAACATTT ACAGAAAGAT AACCCTTGCC CGTTATGCGG ATCGATTGAA CACCCGTCGG TGAGTAATTA TCAGCCCGTC GATATACCTG AAACGCAAAT AGCGCTATCG CTGCAAGAGC AGCGGCTCGA GAGTATCCGA GAGCAGTATT CAGATGCTAA AAACCGAATA AAAACAGATA CCAGACAGCT CGCTGAATAT CGTCTTCAGG CGGCTAATCT TAGTCAGCTG TTGGAAAAAC AGCTGACTGA ATGGCAAGAT AGTCCTTATT TATCTGCCTT TACCTATCAG CAGAGCAGTT TTGCGGATTT ATCTTTATTA ACACAAAGCT TACGCGAAAA ACGTTTTAAT ATTGAGAATC TGCAAAAACA AATTCAGCAA ATAGATGCCC AGCTTCCTGA TTTACGAGAG GTTATGCAGG CGCTAACGCA AAAAGCCAAT GACCATGACA GGTTATTACA GCAGCTTAAT AACCAGCATG CCGTTGCAGA TAATGAAGAT CAGCGATTAG CTAAAGAACA GCAGATGCTT TTAGCACAAC TTGAAGAAAA TCAGCAGGGC ATCTGCCAGC AGCTGCCTGC CGAGTTATTA AAAAAGCAGG TTGAAGTCGA ACAATTATTC AATAGTCCAG CAGCGTGGAT TGAAAATCAG AAGAGTTTAA TTCTCTTATA CCAGTCACAA CAGGCGCAAA GCATAACGCT GCAAAGCCTG GTCGATAAGC AAGCCCATCA AATAGCCCTG CAGGAGCAGC AATATGCACA GCAGCAAAGT GTATTACAGC AGCTGCAGAC ATTATGGCAA TCTAATCAGT CGCAGTTGAC CGAGCAGCAG CGACAAAGGG CAGATGAATT TGGCAGTCAA AGCCAGGCGC AGATTCGCCA GCTGCTTGAA TCTGAAAAAA ATGAACTATC AGGTCAGCTG GAGCTTGCGA TGGCCTCCCT GCTAAATGTG CAGGGGCAAT CTGCACGTTT AGCAGGGCAA CTTGCCGAGC AGAAAAATAC TCAGGCAGAA CTGCAAGGTA ACCAGCAGAC GTTACTGACT GTTTTTAAAA AACAGTTAAT CACTAGTCCT TTTATTGATC AGACTGACTT TATTAATGCG CGTTTAGCAG AAGAGCCATT ACAGGTACTG CTCGCGCTGC AAAAGCAGCT GCATGAGCAG TTACTCACAG AGAAAACCCG TTTAAGTTCG GCACAGCAGA GTCTTGAAAA ACATCTCAAA TTAAGTGTTA CTGAAGAAGA TCCATTAGTC TTAGAAAATG CGCAGGCTGC GAATCAGGAA AAATCTGAGG TCATCGGTGA ACAGCTGGTG GAGAAAAAAG GCAAACTGCA GGCTGATATT CGTTTAAAAG CGCAGCAACA GGCACTGCTG GATCAACAGG TGCAACAAAA AGACAGTGCA GAGCAGTGGG CGATGCTCAA TAAACTGATC GGCTCAGCTG ACGGCAGTAA ATTCAGAACC TTTGCGCAGG GCTTAACCTT AGACAATCTG GTTTATCTGG CGAATAAAGA GATGGCAGAT CTGCATCAGC GTTATCAGCT GCAGAGAAAT CTTGATGAAC CCTTAGCACT GCAGGTCATT GATTTATGGC AGGCGAATGC CGTACGGGAT GTAAAAACCC TGTCGGGCGG GGAAAGCTTT TTAGTAAGCT TAGGACTGGC CTTAGCGCTT TCTAATCTGG TCAGTCATAA GACGCAGATA GAATCGTTAT TTTTAGATGA AGGATTTGGC ACCTTAGATG CGGATACCTT AGAAATCGCC TTAGATGCGC TAGAGCGGTT AAATGCAACC GGCAAGCTGA TTGGGGTTAT TTCCCACGTT GATGCGCTTA AGGAGCGGAT TAATAAGCAG ATTCATGTCA GTAAAGGCAG CGGGGCAGGG TACAGTCAGC TGGATAAGCA ATATGTTTTT GTGGAAAAGA GTTAA
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Protein sequence | MKILSIRFKN LNSLKGHWKI DFQDADFLEN GLFVITGQTG AGKSTILDAI CLALYQQTPR LDRITQSKNE LMTRGTWECS AEVEFSVKGK GYRVFWEQKR ARKSAAGKLQ APICELSLIE GDVLCTKSSE VLKQVIELTG LDFSRFTKSM LLAQGGFAAF LNASPRDRAE LLEELTGTEI YCEIAKHVFE RNKQAQAELD LLIKQADVLE VLSEEQVDEL NKQVQLLAAD KQTVQTDLKD LEGALLWLKN AQVLKEQVEA QLRLLTNAQQ SAAEFKNKQQ QIELAQQAKR LEQPYQNQLL NAEKIQSGET LLVENEQKNK ILQAQLIECK NGAESLTAAQ KSLQESHAVR HNKINEHLMP LDLAIGQLTG LCGEQQLAVD KQINTAVETQ QTLNIRLAQQ KTDNLALKTL NEGLQKQQAA HHLQESLPLI EQQFSFYIKQ QSQLKDSLSG SSELQKKQSV LHNDLLDVHK QVKLSAQALH EKQLLLQQVQ QHRESLLDSG QFSSAGQMNI ILTEVFDQQS QNQQALSLTR QLDDSYARLA AVHKGSAELE QSIKGNQQAL MVSEQQGLEC KNSLLALQKL LKQEQVIAQL SDLKKHLQKD NPCPLCGSIE HPSVSNYQPV DIPETQIALS LQEQRLESIR EQYSDAKNRI KTDTRQLAEY RLQAANLSQL LEKQLTEWQD SPYLSAFTYQ QSSFADLSLL TQSLREKRFN IENLQKQIQQ IDAQLPDLRE VMQALTQKAN DHDRLLQQLN NQHAVADNED QRLAKEQQML LAQLEENQQG ICQQLPAELL KKQVEVEQLF NSPAAWIENQ KSLILLYQSQ QAQSITLQSL VDKQAHQIAL QEQQYAQQQS VLQQLQTLWQ SNQSQLTEQQ RQRADEFGSQ SQAQIRQLLE SEKNELSGQL ELAMASLLNV QGQSARLAGQ LAEQKNTQAE LQGNQQTLLT VFKKQLITSP FIDQTDFINA RLAEEPLQVL LALQKQLHEQ LLTEKTRLSS AQQSLEKHLK LSVTEEDPLV LENAQAANQE KSEVIGEQLV EKKGKLQADI RLKAQQQALL DQQVQQKDSA EQWAMLNKLI GSADGSKFRT FAQGLTLDNL VYLANKEMAD LHQRYQLQRN LDEPLALQVI DLWQANAVRD VKTLSGGESF LVSLGLALAL SNLVSHKTQI ESLFLDEGFG TLDADTLEIA LDALERLNAT GKLIGVISHV DALKERINKQ IHVSKGSGAG YSQLDKQYVF VEKS
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