Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1302 |
Symbol | |
ID | 4625834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1613212 |
End bp | 1614438 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639796518 |
Product | exonuclease subunit SbcD |
Protein accession | YP_942728 |
Protein GI | 119945048 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.315565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAAT TAATGAAGAT ATTACACACT TCAGACTGGC ATCTTGGTCA GTATTTTATG ATGAAAACCA GAGAGTCAGA GCATTTACAT TTTTTAAACT GGTTAATTGA AGTGGTCAAT AAGCAACAGA TCGATGCATT AATCGTTGCC GGTGATATTT TTGATAGCGC ATCCCCGCCT TCCTACGCGC GCAAATTATA CAGTGATTTT ATTGTCAGAT TGCAAAAAAG CAGCTGTCGC CAGCTTATTA TTATGGCGGG GAATCATGAC AGTATTGCCG TGCTCAATGA AAACAAAGAT TTATTAAAAG CATTGGATGT TTCTGTATTA GCCGGATTAA GTGATGATTT AAACGAGCAC ATTATTGAAC TTAAGGATGA TAGGCAAAAT ACGCAGGCAT TAGTTTGTGC ATTGCCTTTT TTACGGGCAG CAGATGTGAT GAGAAGTGTT CAGGGTAGTT CGGCCGCTGA TAAACAGATT TCTCTGCAGC AGGGCATAGC GGACACCTAC CAGTCGATTT TCGAACTCGC TAATGCGCAG TGTCATGAGA AAGCCCTTCC TATTATTGCA ACCGGGCATC TGACTGCGGT GGGCTGCAGT GTTTCTGACT CGGTGCGTGA AATTTATATC GGCACACTGA CCGCTTTCCC TGCTGTGCTC TTCCCTGCTT TTAACTATAT TGCCCTGGGA CATTTACACC GTGCGCAAAA AGTACAAAAA ACCGACCATA TTCGTTATTG CGGCAGCCCG ATTGCCTTGA GCTTTGATGA AACCAGGCAG CAGAAAAATA TTAATATTAT TGAATTTGAT ACAAATAATG CCTTAACCGT TAATGAGACG GTGATCCCTG TTTTTCAGAG AATGCAGGTT ATCAGCGGAG ATTTAGAATC TGTAATAGAG CAGTTACAAG AGCTTAAAAA AGAGTTAGCG GGTGAAAGTG CCTGGATAGA GGTCAAGCTC AAGCAGGCTT TTTATCTTTC CGATGTGCAT GCATTATTAA ATGAACAGGT CCAGGAAAGT CAAATAGAAA TTTTAAAAAT CAGCAGTCCG ACTATTAATG AAAAAAATCA GTATCAGGCT GCGGATAAAT CAACGCTGGA TAATTTAACA CCGGCAGATC TTTTTCAGCA TCGTTTACAG ATTGAAGACA GCTACAGTGA CCAGCAGAGA GAGCAGTTAA CTAAACTGTT TGCCGAAGTC TGCTCTGAAG TGGAGCATAA ATCATGA
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Protein sequence | MDKLMKILHT SDWHLGQYFM MKTRESEHLH FLNWLIEVVN KQQIDALIVA GDIFDSASPP SYARKLYSDF IVRLQKSSCR QLIIMAGNHD SIAVLNENKD LLKALDVSVL AGLSDDLNEH IIELKDDRQN TQALVCALPF LRAADVMRSV QGSSAADKQI SLQQGIADTY QSIFELANAQ CHEKALPIIA TGHLTAVGCS VSDSVREIYI GTLTAFPAVL FPAFNYIALG HLHRAQKVQK TDHIRYCGSP IALSFDETRQ QKNINIIEFD TNNALTVNET VIPVFQRMQV ISGDLESVIE QLQELKKELA GESAWIEVKL KQAFYLSDVH ALLNEQVQES QIEILKISSP TINEKNQYQA ADKSTLDNLT PADLFQHRLQ IEDSYSDQQR EQLTKLFAEV CSEVEHKS
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