| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1299 |
|---|
| Symbol | |
|---|
| ID | 4625317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1606441 |
|---|
| End bp | 1607574 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639796509 |
|---|
| Product | ABC transporter inner-membrane translocator |
|---|
| Protein accession | YP_942725 |
|---|
| Protein GI | 119945045 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACT CAAAAATACC GGTATGGGTC AATGTGTTTG TCCTGCCTAT GGTTAATATT
CTATTAGCCT TTGCATTTTC TGCCATTATT TTTATTGCCG TTGACGTTGA TCCTATTGAA
GCTGCTCAGG TGATGATCCG CGGAGCTTTC GGGTATCAGG AAGGTATTGG TTATACCTTG
TATTATGCAA CTAACTTTAT GTTTACTGGG CTTGCCGTGG CAGTGGCTTT CTCTGCTGGC
CTGTTTAATA TTGGGGGCGA AGGTCAGGCA TATATGGGGG GGCTGGGTGT CGGTATCGCC
TGTCTGGCGC TCGACAGCAG TTTACCTTTT TGGGCTATTT TACCTATTAC CATGTTTGCC
AGTATGGCTT TTGGCGCATT ATGGGCATTG ATACCCGCCT ATTTACAGGC CTATCGCGGT
AGTCATATTG TTATTACGAC TATTATGTTT AACTTTATTG CTGCCTCATT GATGGTTTAT
TTGATGGTCA ATGTGTTTAA GCTTGACGGG CAAATGGCGC CTGTCTCCCG TATTATTGAA
GACAGTGCCA AGCTGCCTAT GTTTCATGAG ATGGCGGCCT GGATCGATTG GTCATTTGAA
TCTTCACCGC TCAATCTGAG CTTCTTTATT GCTTTGGTCT GTTGCCTGTT AGTGTGGATC
TTATTATGGC GCACCCGGTG GGGCTACGCG ATTCGCGCCA TGGGATCCAG TCCAACGGCT
GCTGAGTATG GCGGTATAAA TTATAAAAAA CTGACGATAA TAGTGATGCT TATTTCCGGT
GCGCTATCGG GTTTGTTAGG TATTAATGAG GTGCAAGGTT ATAGCCATCA GTTGAAACTG
GATTTTGTGG CAGGTTATGG TTTTACCGGT ATTGCGGTTT GCCTGATTGG CCGTAACCAT
CCCGTTGGTA TTATTCTGGC CAGCTTATTA TTTGGTGTTC TTTATCAGGG GGGGGCTGAA
CTGTCCTTTG ATTTCCCGAA TATCGATAGA GAGATGATTC AGGTCATACA GGCCTTAGTT
GTTTTATTTA GTGGTGCACT CGCCTTTATG CTGGTAAAAC CCACGGAGCA TTTTTTTGTC
TTTCTGGATA AACGTAAAAC ATTATCCCTT AAGCAGACAA ATCCGGAGAC TTAA
|
|---|
| Protein sequence | MNDSKIPVWV NVFVLPMVNI LLAFAFSAII FIAVDVDPIE AAQVMIRGAF GYQEGIGYTL
YYATNFMFTG LAVAVAFSAG LFNIGGEGQA YMGGLGVGIA CLALDSSLPF WAILPITMFA
SMAFGALWAL IPAYLQAYRG SHIVITTIMF NFIAASLMVY LMVNVFKLDG QMAPVSRIIE
DSAKLPMFHE MAAWIDWSFE SSPLNLSFFI ALVCCLLVWI LLWRTRWGYA IRAMGSSPTA
AEYGGINYKK LTIIVMLISG ALSGLLGINE VQGYSHQLKL DFVAGYGFTG IAVCLIGRNH
PVGIILASLL FGVLYQGGAE LSFDFPNIDR EMIQVIQALV VLFSGALAFM LVKPTEHFFV
FLDKRKTLSL KQTNPET
|
|---|
| |