Gene Ping_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1298 
Symbol 
ID4625316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1604873 
End bp1606444 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content43% 
IMG OID639796508 
ProductABC transporter ATP-binding protein 
Protein accessionYP_942724 
Protein GI119945044 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACAG TGTCCAATGA GCAACGGTTT GCCTTAGAGT TACGGGGTAT CGATAAAAGA 
TTCGGTGCTG TTCATGCCAA TAACAATATT GACCTGCAAG TTCCTGTTGG CACCATTCAC
GGTATTATCG GAGAAAATGG TGCGGGAAAG TCCACGTTGA TGAATATTAT TTACGGATTT
TATATCGCTG ACGCGGGTGA AATTAAGATT GAAGGCATTC CCCGAAAACT GTTAAGTTCT
AAGGAAGCAA TCAGTTATGG CATTGGGATG GTGCATCAGC ATTTTATGTT GATTGACAAC
TTCAGTGTAC TTGAGAATGT GATTTTAGGG GCTGAAAATG GCCCGTTATT AAAACCCAGC
TTAGCAGCGG CCCGCACCGA ACTCGAACGT CTTGCCAAAG AATATCAACT TGATGTGCCC
ATTGATGCCT TGATTGAAGA TTTGCCTGTG GGTTTACAGC AGCGGGTGGA GATTTTAAAA
GCCTTATATC GGGGCGCTAA AATTCTTATT TTAGATGAAC CTACCGGCGT ATTAACCCCT
CAGGAAACGG AACACCTGTT TCATATTTTT GATGCCCTGC GTCGTGAAGG TGTCACTATT
ATACTGATCA CGCATAAATT AAGAGAGATT CTGGCGGCGA CTGATAATGT GTCGGTTATG
CGGCAAGGGG CGATGGTCGC CCATAGAAAA ACGGCGGACA CCAATAAAGA AGAATTAGCT
GAGTTAATGG TGGGGCGTAA GGTCAGGTTA AAAGTTGATA AAAAGGTCGC TAACCCTAAA
CAAATATTAT TATCGACTGA TCAGCTAACC TACACCGATC AGATGGGGGT GGATCGACTT
AAGTCTGTTT CAATAAACAT TAAAGCCGGT GAAATTGTGG GTATTGCGGG TGTCTCTGGC
AATGGGCAAT CGGAATTAAT CAATATGTTA GCAGGCCTAT TGACCCCAAC CAGTGGTAGT
ATCAGCATCG GTAATACTCA CATAGATGCC GGTCACCCGG CAACTCCAGA TAGTATTCGT
CAATTAAGAG TTGGTCATAT TCCTGAAGAT AGGCTGACAA TGGGCTTGAT TAAATCTTTT
TCTGCCGAAG AGTCTGCGAT TCTAGGTCAT CAGAACCAGC CTAAATACAA TGGTAAGATA
CTGAATAAAT TAAAGGTTAT TACTCAGGAA TGTACCCGAT TAATGAAAGA ATGGGATGTT
CGTCCGCAAA ACCCCAAACT GCGCAGTTCA TTATTTTCCG GTGGTAATCA ACAAAAATTG
ATTATTGCGC GCGAAGTAGA CCAAAACCCC AATATATTAC TGATTGGCCA ACCCACACGC
GGCGTAGATA TTGGTGCAAT AGAGTTTATT CATAAACGTA TTGTCGAGTT ACGTGATAAA
GGTAAAGGGA TCTTACTCGT TTCAGTGGAG TTGGATGAAA TTATGACCTT AGCTGACCGG
ATTATTGTGA TGTTTGATGG CCATATTGTT GGTGAAGTGA GTGCTGCGCA AGCCAACGAG
AAAATTCTTG GCATGATGAT GGCCAATATT ATGCCTGATG AATTACAGGC AACAACAGGA
GGCAAGCAAT GA
 
Protein sequence
MSTVSNEQRF ALELRGIDKR FGAVHANNNI DLQVPVGTIH GIIGENGAGK STLMNIIYGF 
YIADAGEIKI EGIPRKLLSS KEAISYGIGM VHQHFMLIDN FSVLENVILG AENGPLLKPS
LAAARTELER LAKEYQLDVP IDALIEDLPV GLQQRVEILK ALYRGAKILI LDEPTGVLTP
QETEHLFHIF DALRREGVTI ILITHKLREI LAATDNVSVM RQGAMVAHRK TADTNKEELA
ELMVGRKVRL KVDKKVANPK QILLSTDQLT YTDQMGVDRL KSVSINIKAG EIVGIAGVSG
NGQSELINML AGLLTPTSGS ISIGNTHIDA GHPATPDSIR QLRVGHIPED RLTMGLIKSF
SAEESAILGH QNQPKYNGKI LNKLKVITQE CTRLMKEWDV RPQNPKLRSS LFSGGNQQKL
IIAREVDQNP NILLIGQPTR GVDIGAIEFI HKRIVELRDK GKGILLVSVE LDEIMTLADR
IIVMFDGHIV GEVSAAQANE KILGMMMANI MPDELQATTG GKQ