Gene Ping_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1290 
Symbol 
ID4625308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1596025 
End bp1596801 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content45% 
IMG OID639796500 
Producthypothetical protein 
Protein accessionYP_942716 
Protein GI119945036 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.813938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTAA GCAGACAGGC ACAGACAGAG TTAATACGCG TTGCAGCTAA AGCAGGGCAA 
TTATTGCATC AGCACGGGGC AGAAAGCCGT TTAGTGGAGC AAACAACACA ACGTATAGGG
ATGGCACTCG GTGCTCGAAG TATTGAGTTG TCCGTTAGCC CCGATGCAAT AGTGATTACC
AGTTTATTTG ATGGTGACTG TATTACCACG ACGCGTCGTT GTTACGATCG CGGTATTAAT
ATGCAGATGG TCTGTGATGT ACAGCGGATC TGTATTATGG CTGAAAAGAA ACTGCTGGAT
GCGAAGCAGG TAAAAGAACG GCTAAATCGT TTAAAACCAA TGAAATATAA TCGTTGGGCA
GTGGTCTTTA TGATTGGCTT GGCATGTGGC AGTTTTAGCC ATTTTTTCGG TGGAGATTGG
CAAGTTTATA TTACTACTTT TTTTGCTTCT GCCGCCGCAA TGACGATACG TCAAGAACTT
GCTCATCGCC ATCACAGCCC TCTGGTCAAT TTTGCGATCG CGGCTTTTGT GGCGACCTCC
ATTGCAAGTC TTGGCGTTGT TTATGAATTT GGTGAAAAAC CTGAAATAGC ACTGGCGGCT
TCGGTCTTAT TACTGGTTCC CGGTTTTCCT CTGATCAATG CCGTTTCCGA TATGCTTAAA
GGACATATCA GTATGGGGAT AGCCCGTTGG GTCTTTGCAA GTTTATTAAC TTTGAGTGTT
TCAGTTGGAA TAGTCGCTTC TATGACGTTA ACGGGGGTTG TTGCATGGAT AGGATAA
 
Protein sequence
MSLSRQAQTE LIRVAAKAGQ LLHQHGAESR LVEQTTQRIG MALGARSIEL SVSPDAIVIT 
SLFDGDCITT TRRCYDRGIN MQMVCDVQRI CIMAEKKLLD AKQVKERLNR LKPMKYNRWA
VVFMIGLACG SFSHFFGGDW QVYITTFFAS AAAMTIRQEL AHRHHSPLVN FAIAAFVATS
IASLGVVYEF GEKPEIALAA SVLLLVPGFP LINAVSDMLK GHISMGIARW VFASLLTLSV
SVGIVASMTL TGVVAWIG