Gene Ping_1267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1267 
Symbol 
ID4624758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1573991 
End bp1575082 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content38% 
IMG OID639796479 
Productsodium/calcium exchanger membrane region 
Protein accessionYP_942695 
Protein GI119945015 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.451037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAA TAGAAAACGT ATGGCCCTTT TTATTAATTA TTTTTTCATG TTATTTATTA 
AAATATGCAT GTGATACTTT TGAGCAAGCT GCCTCTTATT TAGGGAGAAA CTTTCCACCA
GGTGTGAAGG GTGCAACTGT CAATGCAGTC GGATCAAGTA TGCCTGAAAT GTGCGTAGTG
ATTGCATGTT TATTCTGGTT TAACGATCCA TCATTAGTGA TGGTTGCATT AGGAGTGACA
GCGGGATCTG CAATATTTAA TGGCTGTGTT ATACCGGCGC TTTCTATTAT TATGGCAAAA
GATGAGGACG GCTCAGCCGT TAAATCGATT AAATTAACTA AACGCGTGTT AATAAGAGAC
GTATTTTGGG TGTTAACAGC AGAAATTGCA TTGATTATCT TTCTCGGTTT TAATCATTTT
ACACTCTGGA TGGCGGTCGT ATTAAATGTT ATCTATGTAT TTTATGCAGT GCACTTATAT
ATTGATTCAA AACGTAATCG TGAAGGTGAT GACGAAGATG TGTATGAGTA TGAAGAGATT
GATGATCGCG GCGTGTTTTT AAATTTAATT ACCTTTAACT TCAATACCTT ATTTTTCTCA
AATAGACCCT TTACATTAGT CTCGTCGCTG GTTGTTTTAA GTTTAGCGAT TGCTGTTATT
TCTGGCTCTT CGAGTATATT AGTTGAAGGC GTACTAGGCA GTGCATCCGT GCTCGGCGTA
CCTGAATTTT TTGCAGGATT AATCTTTGGG TCTGCGGCAT CTTCCGTTCC AGATTTAATG
TTATCAGTCA AGGATGCTAG AAAAGGAGAA TATGAAGATG CGGTTGCTAA TCCGCTAGCA
TCAAATACTT TTGATACGAC TATCGCTTTT GCATTACCTT TGCTGGCTTG GTTTTTAATT
AACGGTGTTG ATTCATTACC TTTGCTTCAA GATGATAGTT TAACCTTGTT ACGTTGGTCT
ATTGTCGGTA TTACAGGCGG CGTCGCAGCA AGCTTAATTT TTAACTATAA GAAAGTAACT
CGAAATGTTG CATACTTCCT GTTAGCCATG TTCTTTGTGT GGGCTGGTGT TATGTATGCA
TTGATTGGCT AA
 
Protein sequence
MNTIENVWPF LLIIFSCYLL KYACDTFEQA ASYLGRNFPP GVKGATVNAV GSSMPEMCVV 
IACLFWFNDP SLVMVALGVT AGSAIFNGCV IPALSIIMAK DEDGSAVKSI KLTKRVLIRD
VFWVLTAEIA LIIFLGFNHF TLWMAVVLNV IYVFYAVHLY IDSKRNREGD DEDVYEYEEI
DDRGVFLNLI TFNFNTLFFS NRPFTLVSSL VVLSLAIAVI SGSSSILVEG VLGSASVLGV
PEFFAGLIFG SAASSVPDLM LSVKDARKGE YEDAVANPLA SNTFDTTIAF ALPLLAWFLI
NGVDSLPLLQ DDSLTLLRWS IVGITGGVAA SLIFNYKKVT RNVAYFLLAM FFVWAGVMYA
LIG