Gene Ping_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1248 
Symbol 
ID4625005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1559014 
End bp1559826 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content46% 
IMG OID639796461 
Productgas vesicle synthesis GvpLGvpF 
Protein accessionYP_942677 
Protein GI119944997 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.140236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATA GTAACCATTC CGGGCTTGAT CCAAACCAAG CCCTCTACCT ATATTGTTTT 
GTTCACGCCG ATAGCATTCA GAGCGTAACA AGTCAGGCGA TTGAAAAGGA CAGCCCAGTA
TTTATTTATC AGTGGCAAGA TATCGCCGCA GTGCTTAGTC ACGTGCCCAC CTCTTATTTC
ACGGGCTATG ATGATGAAGA GCCTGAGCAA ACTATTGCCA GAATCCTACC TCGAACGCAG
CTGCATGAGC AGGTTATCGA AGAAGTCATG CGTCAATCGC CGGTTTTTCC TGCTCAGTTT
GGCACGCTCT TTTCTTCACA GGAAAGTCTG GAACAAGAAA TTTCGCAACA GTATTTGGCT
ATTACCCACA CCCTGAAAGA GGTGTCCGGA TCGGTAGAAT GGGCGGTTAA AGGTGTGCTG
GATAGAGGTG TAGCAGAGAA GGCACTTTAT TCACAACAGC TAACAGAACA ACAGAATAGT
CTCTCAAGTT CACCTGGAAT GCGGCACCTT CAGGAGCAAC GTCTTCGCCG AGAAACTCAG
AGTAAATTAA ACTCCTGGTT ACATCAATTG TACACCGACA TCGCGACACC ACTTTCTGAA
CTGTCTGGCG ATTTTTTCCA GCGCAAGATA CCGTCCTCCA TCGAAGAAGG CAAAGAAGTT
ATCTTGAACT GGGCATTTCT CGTGCCAGAG TCTGCTGGTG ATGACTTTCA TGCCCAAATT
GACAAACTGA ATCAAAGGCT TAACTCCTTT GGGCTGGTGA TTCAATGCTC GGGGCCTTGG
CCTCCTTACA GTTTTTGCAA TCAATCATCA TGA
 
Protein sequence
MKNSNHSGLD PNQALYLYCF VHADSIQSVT SQAIEKDSPV FIYQWQDIAA VLSHVPTSYF 
TGYDDEEPEQ TIARILPRTQ LHEQVIEEVM RQSPVFPAQF GTLFSSQESL EQEISQQYLA
ITHTLKEVSG SVEWAVKGVL DRGVAEKALY SQQLTEQQNS LSSSPGMRHL QEQRLRRETQ
SKLNSWLHQL YTDIATPLSE LSGDFFQRKI PSSIEEGKEV ILNWAFLVPE SAGDDFHAQI
DKLNQRLNSF GLVIQCSGPW PPYSFCNQSS