| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1247 |
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| Symbol | |
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| ID | 4625004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1556826 |
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| End bp | 1559024 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639796460 |
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| Product | cell division protein CDC48 |
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| Protein accession | YP_942676 |
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| Protein GI | 119944996 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.292363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0692611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAA AAAGCACATC ACCCCTTATG CTTCAAGTTG CAGAGGCGCT AAGTAAGGAT
GTTGGCCGTA CTTATGCCCG TATTGGACCA GAAGACATGT TACGTTTAGG GCTTGAAGTC
GGCGATATAG TGACGGTGAA TGGAAAACGG CGCACAGTGG CCAAAGTGAT GATTTGTTAC
AAACCGATGC GCGAGCAGTC TTGCATTCAG TTAGATGGTA TTAGCCGAAG TAATGCTGGT
GTAGGCCTTG GCGATCGTGT TGAGGTCGAA CGGATTATCG CTTCCCCCGC TCAGCGCTTG
ACACTCACTC CGGTCGATCT CGCTCCCCGA AAAAAAGATC TTAACTACAT AGGTAGTCTG
GTTGATGGCC TGGTTGTTAT GGAAGGAGAT CGTATTCGAG TTTCCCTTTT TGGCAGCCGC
TCAATCGATT TTAGAGTGAA AAATGTCAGT CCAAAATCTC CAGTCTTGAT CGGCGGTACC
ACACAGTTAA CGATTGGTGA TGAAGCTGAA GAGGAGACGT CGTCATCCTC GCTATCTTAT
GAAGATGTGG GTGGGGTTAA ACCTCAACTG GCGCGAATAC GAGAGATGAT CGAACTGCCA
CTGCGCTATC CTGAATTATT TGATCAATTG GGTATCGACG CCCCTAAAGG TGTCCTCATT
TATGGGCCAC CGGGCTGTGG GAAGACCCTT ATTGCTCGGA TCATAGCCCA TGAAACCGAA
GCGAACTTTT TTTCGGTGAG TGGCCCTGAA ATTATTCATA AATTCTATGG TGAAAGCGAA
GCGCACTTGA GAAAAATTTT CGAAGAGGCG GGGCGTAAGG GACCCAGTAT TATCTTTATA
GATGAAATTG ATGCCATCGC ACCACGTCGA GACCAAGTTG TCGGTGAGGT GGAAAAGCGG
GTAGTGGCAC AATTACTGGC ACTGATGGAT GGCCTAAACA GTCGCCAGAA CATTATCGTC
ATTGCCGCCA CTAATCTTCC CAATCTTCTG GATCCGGCGC TTCGTCGGCC CGGACGTTTT
GATCGTGAAA TCTGTATTCC CATCCCAGAT CGTGATGGTC GATTACAAAT TCTTGAGATC
CACACTCGTG GTATGCCCTT GGCCGATGAT GTGAAAATGA ACCATCTTGC CGATGTGACC
CATGGTTTTG TTGGTGCTGA TCTTGAAGCG CTTTGTCGTG AAGCTGCGAT GTCGGTCTTA
CGGGAAATTC TCCCAAGTAT CAATTTATCC CTTGCCAGTA TCCCTTGCGA GCAGCTGGCA
AAATTGCATG TGGGTATGGC TGATTTTCTT GTCGCATTAC GGGAAGTCGA ACCTTCTGCT
ATCCGTGAGG TCTTCGTGGA TATTCCCAAC GTGAGCTGGG ATGATGTTGG TGGGTTATCA
GATATAAAAC AACAGCTTAT TGAAGCTATT GAATGGCCCC TTAAGTACCC AGAACTCTTT
GAGCAATCCG GCGTGCGACC TCCCAAAGGG TTATTACTTT GCGGCCCGCC GGGTGTGGGA
AAGACGCTGA TCGCCAAGGC AGTCGCCAAT GAAAGTGGTG TTAATGTGAT TTCTGTCAAA
GGACCAGCAC TTATCTCTAA GTATGTTGGT GAATCTGAAA GAGGGGTGAG AGAGGTTTTT
CACAAAGCCC GCCAAGCGGC TCCCTGCATT ATCTTCTTTG ATGAAATCGA TGCGCTCGTT
CCACTGCGTG GCAGCGGAGG GTCAGATTCC CATGTAGCAG ATCGCGTTCT CAGCCAGTTT
CTTGCTGAAA TGGACGGCAT AGACGATCTC AAAGGCGTGT TTATCTTCGG TGCCACCAAC
CGCCGTGATC TGATCGATCC AGCCATGCTC AGACCGGGTC GTTTTGACCA AATTGTCAAT
ATCCCACTCC CCGATACTGA GGGACGTACG GAAATTTTTG CTGTTCATTT GCGAGATAAG
CCATTGGCTG AGGGGATCGA AGCACAAAAC CTTGCTGAAC GAACATCCGG CTATAGTAGT
GCTGAGATAG CAGCCTTGTG TAACCGTTCG GCCTTGCGGG CTATTCGCCG AGTAGTCGAT
ACAGCGGGTG GAGATCCGAC CAAGGGACTC AACGTACTGA TTGAACTGGA AGATTTTGAG
TTTACCCTAG CGGAAATGGG GATTAAAACG CAAGATTTGA CCTGCAATCA GCCACAAATT
AATTCCACAG AGAGTCAGAG TAACGTTTAT GAAGAATAG
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| Protein sequence | MNEKSTSPLM LQVAEALSKD VGRTYARIGP EDMLRLGLEV GDIVTVNGKR RTVAKVMICY
KPMREQSCIQ LDGISRSNAG VGLGDRVEVE RIIASPAQRL TLTPVDLAPR KKDLNYIGSL
VDGLVVMEGD RIRVSLFGSR SIDFRVKNVS PKSPVLIGGT TQLTIGDEAE EETSSSSLSY
EDVGGVKPQL ARIREMIELP LRYPELFDQL GIDAPKGVLI YGPPGCGKTL IARIIAHETE
ANFFSVSGPE IIHKFYGESE AHLRKIFEEA GRKGPSIIFI DEIDAIAPRR DQVVGEVEKR
VVAQLLALMD GLNSRQNIIV IAATNLPNLL DPALRRPGRF DREICIPIPD RDGRLQILEI
HTRGMPLADD VKMNHLADVT HGFVGADLEA LCREAAMSVL REILPSINLS LASIPCEQLA
KLHVGMADFL VALREVEPSA IREVFVDIPN VSWDDVGGLS DIKQQLIEAI EWPLKYPELF
EQSGVRPPKG LLLCGPPGVG KTLIAKAVAN ESGVNVISVK GPALISKYVG ESERGVREVF
HKARQAAPCI IFFDEIDALV PLRGSGGSDS HVADRVLSQF LAEMDGIDDL KGVFIFGATN
RRDLIDPAML RPGRFDQIVN IPLPDTEGRT EIFAVHLRDK PLAEGIEAQN LAERTSGYSS
AEIAALCNRS ALRAIRRVVD TAGGDPTKGL NVLIELEDFE FTLAEMGIKT QDLTCNQPQI
NSTESQSNVY EE
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