| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1239 |
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| Symbol | |
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| ID | 4624996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1545733 |
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| End bp | 1548165 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639796452 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_942668 |
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| Protein GI | 119944988 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0849983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTTA GAAAAAAAAT AAGGTATATT ATATTGCCGG TGATCATCGC TCTTTCTGCC
ATGATTTCTT TGCTTTATTA TCATCTTTAT AAGAATCAAA TTATAGAGAA TAAAATCACC
CTGCTTAACG GTCGTCTTGA AAATCAATTA TTGCACGCAG AATACCAGCT TGATTATGTT
AAAAGCTATT TAAGACAAAA AATTGAGAGC AAAGAAGCTT CTCTTATTTT TAATGCCAAA
CAAGGTGACA ATAATCTGTC TGCCCCGGAT ATCACCGCGT TTCTTAATCT GTTTGTTAAT
CGAAAAAATA GCGCCAATAA AAGTAATCAT GTGATTAATG ACTTTGTTAT TTTTGATTCT
TATAAAAAAT TAATTGTTCA TATTAATACG CGCGATCCCT TCGCCAAGCC AATGTTAAAA
ACAACCACTA AAGCGGTGTT GGATCAGATC TTCGATCAAG CTGATCCGAA CAAAAAAATC
TCTCAATATC ACTATTTTCT TGATGACCCC TATATTAATA AAATGCCATC GTTATATATT
ATTCAGGCTT TTTCGCGCTA TCAGCTATCT TCTAAATTAT TCTATGAAAG TAACGAAGAT
ACCTATTTAG CGCAAGCACA ACTGGATCTC AATTTCTTTA CAGAAGAAAT TAGGGTGCTT
ATTGACGAAA ATAATGGATA TTTTAACTAT CGGTTTATAA ATAAAAATAC CAATGCTGAT
AACTTTTCCT TCACTAGCAC CCCATTTCAA GTGAATGATA ACGGCGCTTA TGAGGGCAGA
TTTGGAAGCT CATTATTTGA TATTATATTA ACACTGGATA AAAACTATTT TGCAGAGCAG
TTAAATAATC TTATTGCTAC ATTTTTACTC CTCAATTTTA TTGTCATTAT ATTAAGTTAT
TTGCTGCTTA TTTGGCTCAT TGACCAACAA ATTATACTGC CTATCACCAA ACTGGCTAAA
AGTATAAAGG AAGTTGAAGC TTCACTTGTT GTCGAGCTTA AGCCATTGAC AACTAAGGAC
GAAGTTGCTG ATTTAAATGA AAGCTATATT TCACTTATTA ATAAAATAAA TACTCTGGCA
AACAATGACT CACTGACGGG TCTTGCAAAC AGGGGGAGCT TTAACGAAAA GTTGTCCGCT
ATCATGGACG CCAGGCAAAA AAATAAAACC TACGTCGCAC TTTTTTTTAT CGATTTGGAT
AATTTTAAAT ATGTAAATGA TACTTTTGGT CACGATACAG GAGATCGTTT ACTGGTCGTT
TTTAGCCAGA GGTTACAGCA GTTACTAAGG GCTGAGGATA ACTTCATTTC TGGCAATATG
ATTGATAGTA TTGCCAGACT TGGTGGGGAT GAGTTTGTTA TTTTAATGAA TGGATTACCC
TCAATAGAGA CGATCGAGAG TATCGGAAAA CGCATTTGTG ATTTATTTCA TAATGGCTTT
AGGATTGGTG AAGAGCAATT TGATGTACAT GCCAGTATCG GCATTGCTTA TTCAAATGAC
CATCAAATCA ATGGTGAGGG ACTATTAACT CAAGCCGATG ACGCCATGTA TTTGGCCAAA
AGAGCGGGTA AAAATAACTT TAAGCTTTTT TCTGATGAGA TTAAAGAGAA AATGCTTTTT
GAAAAAAATA TCGAAAATGA GCTAATTGAT GCGCACCGTG ATAATAAATT ACACTTGGTT
TTTATGCCCG CCTACTGTGC TGAAACACGC ATACTAAGGG GGTATGAAAT ATTATTACGC
TGCCCGAGTC TGCTGAATGT AGGTATTGGG CCCGATGTTT TTATTCCGAT TGCAGAAAAT
ACAGATCTTA TTTTAGCGAT TGATTTATGG GTTGCACAAC AAACTGTTAT TAGGCTTAAA
GAAGTCATCC ATAAAAATAG ATTTACAGGT TTCTTCTCGT TTAATGTCTC CTCTAAATCA
CTAAGAAATG ATCGATTTTA TACTACGCTA AAAGAATTTA TCAATACTAG TGATATAAAT
CCTAAGCAGC TGGAACTTGA AATAACAGAA ACTTGCTTGA TGCCGGATGA TCATCAGGCG
GTTGCCAGCC TTGACCAGCT TAAATCCTTA GGTGTGCGCA TTGCGCTTGA TGACTTTGGC
ACTGGATATA CCTCATTTGG ACAGATACTT AATTATCCTT TAGATACATT AAAAATTGAT
CGTTCCTTTG TGACTGATTT GCGCAATACC CCGGTTGGTC AAAAGCCCAC TTTGGATATT
ATATTTGAGC TTGCAAAAGC GTATCAGCTT AGTGTGATTG TTGAGGGCAT TGAAACGCAA
GCTGATTTTG AGCATGTTAA AACGTTGGGT TGTGATATTG TGCAGGGTTT CTATTTTTCC
AACCCGCGAA CATGGACAGA GGTGCTGAAG CATTGTGGTA AATTACATCA AATAGATAAA
AGGCCCGATC AACAGAAAAA TATTGCATGT TAG
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| Protein sequence | MTLRKKIRYI ILPVIIALSA MISLLYYHLY KNQIIENKIT LLNGRLENQL LHAEYQLDYV
KSYLRQKIES KEASLIFNAK QGDNNLSAPD ITAFLNLFVN RKNSANKSNH VINDFVIFDS
YKKLIVHINT RDPFAKPMLK TTTKAVLDQI FDQADPNKKI SQYHYFLDDP YINKMPSLYI
IQAFSRYQLS SKLFYESNED TYLAQAQLDL NFFTEEIRVL IDENNGYFNY RFINKNTNAD
NFSFTSTPFQ VNDNGAYEGR FGSSLFDIIL TLDKNYFAEQ LNNLIATFLL LNFIVIILSY
LLLIWLIDQQ IILPITKLAK SIKEVEASLV VELKPLTTKD EVADLNESYI SLINKINTLA
NNDSLTGLAN RGSFNEKLSA IMDARQKNKT YVALFFIDLD NFKYVNDTFG HDTGDRLLVV
FSQRLQQLLR AEDNFISGNM IDSIARLGGD EFVILMNGLP SIETIESIGK RICDLFHNGF
RIGEEQFDVH ASIGIAYSND HQINGEGLLT QADDAMYLAK RAGKNNFKLF SDEIKEKMLF
EKNIENELID AHRDNKLHLV FMPAYCAETR ILRGYEILLR CPSLLNVGIG PDVFIPIAEN
TDLILAIDLW VAQQTVIRLK EVIHKNRFTG FFSFNVSSKS LRNDRFYTTL KEFINTSDIN
PKQLELEITE TCLMPDDHQA VASLDQLKSL GVRIALDDFG TGYTSFGQIL NYPLDTLKID
RSFVTDLRNT PVGQKPTLDI IFELAKAYQL SVIVEGIETQ ADFEHVKTLG CDIVQGFYFS
NPRTWTEVLK HCGKLHQIDK RPDQQKNIAC
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