Gene Ping_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1229 
Symbol 
ID4624496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1530017 
End bp1531450 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content39% 
IMG OID639796442 
Productsensor histidine kinase 
Protein accessionYP_942658 
Protein GI119944978 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.131746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAATA ATATAACCAC AGTAATCTCT ATTCAAAAAC GATTAATAGT ATCAACGGTC 
AGCGTTGCAA CCCTGTTAAT TTTTACTTCA TGGATTTTTG TCTTTCATGA AACTAAAAAT
GAAGTCGATG AGGTTTATGA TGCGCGCTTG GGACAACTGG CTAAAATTCT GGCGCTTAGT
ATGCCGAGTG TGATGGATTT GGCGCCTTCT GTTCGAGATG AAATCTATGC TGATTGGTCG
AGCGTCATTA GTGATGTTGA TAAAGATAAA ATTGATTCAT TTCCGAGCGT GGGTCATCCG
GATGACCAAA ATTTATTTTT TCAATTTTAT ACCAATGGTA ATCTGGTATT TAAATCACCC
GGTGCGCCCG AACCCCTCAA TACGGGAGAC CTGTATTCTG GTACCGTTAA CCTAAATAAT
GAACAGTGGC ACTATTTTCA ATTAAAAATT CCTTCTCGGG TCAATCCTAA CGCCTATGTG
GTGGTTGCTG AAAAACAGTC AATCAGAGAT GAGGTTGTTG ATGAAATTGC CTTATCAACC
AGTTTACCGC AACTTTTATT AATTCCTACT CTGGCACTTA TATTGTTCTT TTTAATTAAA
AAGTTTTTAC GGCCCGTTAA TGAATTACGC TTAGCCGTAT CGCAGTGTGA TGTTAATAAA
TTAGAATCGA TAAAAATAGA TCACCCGGCA GTTGAACTCG AACCACTGGT ACAGCAACTT
AACTACCTGT TAAGTGAATT AGATAATGCC CGGGAGAGAG AACGCCGCTT TACCCGCACT
GCGGCACATG AATTAAAAAC ACCGCTGGCG GTGTTAAGAT TAAATATTGA AAATGCATTG
GCAAGTGAGG ATCAAGCATC ACAGGCTTAT GCGCTTAACA ACATAGTGCG AGGCGTTGAT
AGAACCGACC GGTTAATTCA ACAATTGTTG ATGCACTCTC GCATTGAAGC TAAACAACGA
AATATTTTCA AAAATATAAA TATCGCCGCA CTAATTCGGG AGGTTATTGC TTTATTGGCG
CCTTTGGCGT TAAAGAATAA TCAAGAAATC TCTTTTTCTG GTCCTGATGA ATGTATTATT
CAGGGAGAGG GGATGTTTAT CTCTATTTTA TTTAGTAATT TAATCGATAA TGCAATTCGT
TATTCCGGTG AAAATAGTGA GATAAAAATA AGCCTAACCA TTAATCAGTC TGAATCCCAT
CACAATATAG TCGAAGTACT TGTTCAGGAT AATGGTCCAC CAATACCGAC GGCTGTAAGA
GATAAAATAT TTGAAAAATT CTTTCGGGCG CACAGTGAAA AAGGCGATGG TGCAGGACTT
GGAATGGCTA TCGCGGCCGA GGCTGCTAAG TTACACGGGG CTTCAATAAG TTTGTTACCC
TATGATAAAA CGTTACTTAA TACTTTTCTT TTCACCATGG ATTGTGGCAA ATAA
 
Protein sequence
MKNNITTVIS IQKRLIVSTV SVATLLIFTS WIFVFHETKN EVDEVYDARL GQLAKILALS 
MPSVMDLAPS VRDEIYADWS SVISDVDKDK IDSFPSVGHP DDQNLFFQFY TNGNLVFKSP
GAPEPLNTGD LYSGTVNLNN EQWHYFQLKI PSRVNPNAYV VVAEKQSIRD EVVDEIALST
SLPQLLLIPT LALILFFLIK KFLRPVNELR LAVSQCDVNK LESIKIDHPA VELEPLVQQL
NYLLSELDNA RERERRFTRT AAHELKTPLA VLRLNIENAL ASEDQASQAY ALNNIVRGVD
RTDRLIQQLL MHSRIEAKQR NIFKNINIAA LIREVIALLA PLALKNNQEI SFSGPDECII
QGEGMFISIL FSNLIDNAIR YSGENSEIKI SLTINQSESH HNIVEVLVQD NGPPIPTAVR
DKIFEKFFRA HSEKGDGAGL GMAIAAEAAK LHGASISLLP YDKTLLNTFL FTMDCGK