| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1228 |
|---|
| Symbol | |
|---|
| ID | 4624495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1529371 |
|---|
| End bp | 1530027 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639796441 |
|---|
| Product | two component transcriptional regulator, winged helix family protein |
|---|
| Protein accession | YP_942657 |
|---|
| Protein GI | 119944977 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.169339 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTT TATTAGTTGA AGATGATGTT ATGTTAGGCG AATCCATGGT GGTTTCATTA
ATTCGTCATG GATACACAGT CGATTGGCTG CAATTGGGCG CTGCGGTAGA GATGACTTTA
AGAACTGAAA ATTTTACGGC GATAATCTTA GATTTAACAC TGCCGGATGC CGACGGTTTA
GATATCCTGA GTCAAGTCAG GAAAGCGGGA CATAAACTGC CAATCTTAAT TTTAACTGCG
CGAGATGATA TTGATGACAG AGTTAAAGGT CTTGATGGTG GGGCAGATGA TTATTTGCTG
AAACCTTTTG CTTTACAAGA ACTGCTGGCG CGTTTACGGG TTATTGTCAG ACGGGTATCG
GGTTATGCTG AATCAAAGAT TGAACTGCAT GGCTTGGTTA TCTCTTTGGC AAAAAACACC
GTTGAGTATC ATGGTGCTGC TATAAAATTA ACCAATACTG AATTTAAATT ACTGACAACC
TTAGTGACCA AAGCAGGTCG AGTATTAAGT AAAGAATATT TACAGCAAAC TTTATATGGC
TGGGATGAGA TGGCGAGCGA TAACGCGATT GAAGTCTATA TACATAATTT ACGTAAGAAG
ATTAACAACC AATTAATTAA AAATATCAGA GGGGTTGGGT ACATCATTGA AAAATAA
|
|---|
| Protein sequence | MRILLVEDDV MLGESMVVSL IRHGYTVDWL QLGAAVEMTL RTENFTAIIL DLTLPDADGL
DILSQVRKAG HKLPILILTA RDDIDDRVKG LDGGADDYLL KPFALQELLA RLRVIVRRVS
GYAESKIELH GLVISLAKNT VEYHGAAIKL TNTEFKLLTT LVTKAGRVLS KEYLQQTLYG
WDEMASDNAI EVYIHNLRKK INNQLIKNIR GVGYIIEK
|
|---|
| |