Gene Ping_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1213 
Symbol 
ID4623764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1515732 
End bp1516076 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content40% 
IMG OID639796428 
Producthydrogenase nickel insertion protein HypA 
Protein accessionYP_942644 
Protein GI119944964 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0988006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAT TATCCATTGC AGAAAGCATT ATTGAACTGC TCGAAGAACA TGCCGTTACG 
CATAAATTTA AAAAGGTGAC TAAAATTATA TTAGAAATCG GTGTGTTGGC CGGAATAGAG
AAATCGGCAT TGTTTTTTTG TTTTGATGTG GCTGCGCAAA ACAGCCTGGC TGAAGGCGCA
GAACTCTTGA TTGAGGATAA ACTTGCTCAA GGAGTTTGCC AAAATTGCCA TCTGCAGGTA
ACGACCACAG GTTGGTATGA ACCCTGCCCC TATTGCGGTC AACTGCTTAT TAACATAACT
GAAGGTGAGC AGATGAAGAT TAAATCTTTA GAAGTGGAGA ATTAA
 
Protein sequence
MHELSIAESI IELLEEHAVT HKFKKVTKII LEIGVLAGIE KSALFFCFDV AAQNSLAEGA 
ELLIEDKLAQ GVCQNCHLQV TTTGWYEPCP YCGQLLINIT EGEQMKIKSL EVEN