Gene Ping_1211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1211 
Symbol 
ID4623762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1514677 
End bp1514931 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content42% 
IMG OID639796426 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_942642 
Protein GI119944962 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0975666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAATAA GAGAGCAGAC TATGTGCCTA GCAATCCCTG GACAAGTTAT TTCAATTAAT 
CAATCAGCTT CGCCGATCAC AGCAAAAGTT AATTTCAGCG GGATCATAAG AGAGGTCGTT
GTTGAATGGA TTGATCAAGT TGCAGTGAAC GACTACGTGA TTGTTCATGC CGGATTTGCC
ATCAGCAAAC TGGATCAACA GGCGGCCTTA GAAACCCTGC AGCTTTTTGA ACAATTTGAA
CAGCAGCAGG AATAA
 
Protein sequence
MIIREQTMCL AIPGQVISIN QSASPITAKV NFSGIIREVV VEWIDQVAVN DYVIVHAGFA 
ISKLDQQAAL ETLQLFEQFE QQQE