| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1200 |
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| Symbol | |
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| ID | 4623602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1495519 |
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| End bp | 1497378 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639796416 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_942632 |
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| Protein GI | 119944952 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.645678 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACAAA ATAAAAAATC AGCAGTAAGG AAGGTTGATG ACTCAAGTCA AATCTATCGG
ATGCCAGATG GATTACTACC AGATCCTATC GCTGATTTCA TCAAGTTGTC TGCTGCCGAA
GGTGATCTCC TGTTCTGGCA ATGGGAACCA AATTTAGGGC GCGTCGACTT CTATACGCCA
GAAAAAGCGG CGGAAAAACA AAATTTACGG CGTCTTGGCG AAAATATATC AAACTTGATC
GCTTCTAGGG TTGATAGTTT TACACTTCGC AGTGAAAAAT ATGAGATTAA AATTTGTGAC
CCTCAGGGCA ATGCGACATG GAAAAAGATT TCCCTGCGAT TTTTCTTGGG AGCGGATGGG
GAAATTGAAC GGGTGGTTGG TACTGCGCAG GACATCACAG ATTTGATAGC AATGCAATTG
GGGCTTGAAA ACCAACTCGA TTTTATTAAT ACCCTTCTGG ATAGCTTGAG CAGTCCGGTA
TTTTTCAAGG ATGCTGAACT GGTGTATCGC CATTGCAACA AAGCCTTTGA AGAATATTTG
GGCAAGCCAA AGAAGGATAT CCTTGCAAAG ACGGTATTTG ATTTGTGTCC CCCGCATTTG
GCGGAAATTT ATCACCGAGC AGATCGGGAT CTTCTTGAGC AGCGCTTACC ACAAGTGTAT
CAAACAAAAG TACATTCAGC CGATGGGATG GAGCACAATG TGATTTTCAA CAAATCGATG
GTGTTCAACA AAAAGGGCGA GATAACTGGA ATGATTGGTA TCATCAATGA CATTGATGAT
CGCGTCCAGA TGGAAAATAG ACTGCAAAGG ATAATGGACA TTAAAGACGC GATCATGGAG
ATAAACCGTG CAATCACTGA TGCGAACACA TCGGAACAGT TTTATGCGAT TGTCCTTGAC
TGTATTCTTT CGGCCATGCA ATCGGCTGAA ACCTGCGGTT TCCTGATGCT TGATTCTGTA
GGCAACTTAA AAATGGTGGC TGCCAGTGGA TTATACAACG CATGGAAAAA ACCAGTGCAG
GTGGAATTGG AAAAATCCAT GGCCTGGAAT GCGATGGCAG AAAATAAAAA AAGCTGTTTT
TATATCGATG ATATCCACAA ATTTTCCAGG CAAAAAAGCA TTGAATCGCA TGCTTTATTG
CAGCAACTGA AAATACGTTC CCTGCTCGGT GCTCCTATTC TTAACGAAGG AAAATTGATC
GGATTCATTA CTGTCGGCAG CCGCAATATT GACGCCTATG ACGAAACTGA CCTGTTTATT
ATGGAGTATG TGCGCAGTCA AATAATCCAG GTTCTTAATC GACAATTTTT ATATGATAAG
AATGTTACTC TGGCGCGATA TGATAGTTTG ACGGGGTTGC TCAACCGCAG ATATTTTGAA
GAATTATTTG AAAGACATCA GAATCGCGCA AAGCGTTATG ATGAAAAATT TCATTTGGTC
GTAATAGACC TTGATAATTT TAAAGAGATT AATGACCAAT GTGGCCATCT TTGTGGGGAT
GCGGTACTTG TAGATTTCGC CAAAAAATTG ACCGCCTTAT TTCGTGAATC TGATATTATT
TGCCGCTTTG GCGGTGATGA ATTCCTCCTT GTATTAATAG ATATAAATAT CAGCAAACTG
GTGCAGAAGA TTGAATTAAT AAAAACAAAA CTTCAAACTA TCCCCTTTAT TTACAATGAA
AACAGTCTGC CTTATAGTTT CAGTTATGGA ATAGCGGAAT GGCCTGCGGA CGGTGCCAAT
CTGGATCTCC TGACTTGCCG TGCGGATAAT GAGATGTACA AGAACAAGCG CGCGTCAAAA
AAACAGCCGA ATAAGATGCA CCACGCCAGT CAAAAAACAG AATCTGCGGC ATTTATTTGA
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| Protein sequence | MVQNKKSAVR KVDDSSQIYR MPDGLLPDPI ADFIKLSAAE GDLLFWQWEP NLGRVDFYTP
EKAAEKQNLR RLGENISNLI ASRVDSFTLR SEKYEIKICD PQGNATWKKI SLRFFLGADG
EIERVVGTAQ DITDLIAMQL GLENQLDFIN TLLDSLSSPV FFKDAELVYR HCNKAFEEYL
GKPKKDILAK TVFDLCPPHL AEIYHRADRD LLEQRLPQVY QTKVHSADGM EHNVIFNKSM
VFNKKGEITG MIGIINDIDD RVQMENRLQR IMDIKDAIME INRAITDANT SEQFYAIVLD
CILSAMQSAE TCGFLMLDSV GNLKMVAASG LYNAWKKPVQ VELEKSMAWN AMAENKKSCF
YIDDIHKFSR QKSIESHALL QQLKIRSLLG APILNEGKLI GFITVGSRNI DAYDETDLFI
MEYVRSQIIQ VLNRQFLYDK NVTLARYDSL TGLLNRRYFE ELFERHQNRA KRYDEKFHLV
VIDLDNFKEI NDQCGHLCGD AVLVDFAKKL TALFRESDII CRFGGDEFLL VLIDINISKL
VQKIELIKTK LQTIPFIYNE NSLPYSFSYG IAEWPADGAN LDLLTCRADN EMYKNKRASK
KQPNKMHHAS QKTESAAFI
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