Gene Ping_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1195 
SymbolarcA 
ID4623597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1489165 
End bp1489881 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content35% 
IMG OID639796412 
Producttwo-component response regulator 
Protein accessionYP_942628 
Protein GI119944948 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACCG CAAACATACT TATTGTTGAA GATGAGTTAG TCACACGTAA CATGTTAAAA 
AGTGTTTTTG AAGCAGAAGG ATATAATGTT TTGGAAGCGA ATGATGGTAA TGAGATGCAC
CAGGCCATCA AGGAAAATAA TATTAACTTG ATTATTATGG ATATTAATTT ACCTGGTAAA
AATGGTCTGT TATTAGCGCG AGAGTTACGT GAACATGAAA ATATTGCGCT TATTTTTTTA
ACGGGTCGTG ATAATGAAGT TGATAAAATA CTGGGATTGG AAATTGGTGC CGATGATTAC
ATCACTAAAC CTTTTAATCC TCGTGAATTA ACCATACGTA CACGAAACCT GTTAACACGT
ACTATGCAAG ATAATATTTA TTTTGAAGAA ACAGGTAAAA AAGTAGAAAA TTACAAATTT
AACGGTTGGA CACTTGAAAT AGAAAGTCGC TCACTGATTA GCCCTGATGG TAATATCTGT
AAATTACCAC GCAGTGAATT CAGAGCTATA TTACATTTCA TTGAAAATCC GGGAAAAATT
CAAACACGCG CAGATTTATT AATGAAAATG ACCGGACGAG AATTAAAAGC ACAGGATCGT
ACTGTTGACG TTACTATCCG CCGTATCCGC AAACATTTTG AGAGTATTCC TGATGCACCT
GAAATTATTG CGACCATTCA TGGTGAAGGT TACCGCTTCT GTGGTGATGT AGAATAA
 
Protein sequence
MSTANILIVE DELVTRNMLK SVFEAEGYNV LEANDGNEMH QAIKENNINL IIMDINLPGK 
NGLLLARELR EHENIALIFL TGRDNEVDKI LGLEIGADDY ITKPFNPREL TIRTRNLLTR
TMQDNIYFEE TGKKVENYKF NGWTLEIESR SLISPDGNIC KLPRSEFRAI LHFIENPGKI
QTRADLLMKM TGRELKAQDR TVDVTIRRIR KHFESIPDAP EIIATIHGEG YRFCGDVE