Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1185 |
Symbol | |
ID | 4624484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1476101 |
End bp | 1476871 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639796397 |
Product | hypothetical protein |
Protein accession | YP_942618 |
Protein GI | 119944938 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.129857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAAATC GATCAGTTCG CATATTACAA CGAATGAAAA GTTCAGTTTG GCGGATTATT GTGAAGTACA ACAATAGTCA TTTAATTAAG GAGAACCGTA TGAAATTCAA ATCGTTAAAA GTAGGCTTAG CTACTTTAAG CTTGTCTATT GGTTGTTTAT TTAATGTGGC AAATGCAGGC GTGATAACTG ATACAACTGA TAACTCATTC ATTGATCAAA CTACAAATCT AGAATGGATG GATTTTGGTA TAAACAACGG CCAGAGTTAT AACTACGTAG CCTCACAGTT GGGTTCTGGC GGGGAATATG AAGGTTGGTC TCTACCGACA AGTGGCCAAG TGTACGCGAT GTGGGCAAAT GCATTTTTGG GACTCGGTTC TGAGGTGGTG GATCCTAATT ATTACGGAAC CGGACAGGGG AGAGTGGATG ATCGTAACGC TCCGTTAGTT TCGGTATTGG ACCCAGTAAT GGATGCGATG GGAACGAACT ACAGGGCGGC TAGTGGTGAT TTTTCAACGG GAGTTTTCCT CGGGGAAAAT GGTTATAGTG CGTTTCGTGT TTATAATGAT CGGCGAAGCC AATGGATAGA TTTTTCATGG CTAATGGATA ATGGGAGGTT AAATATTGGA GGAGACACGG CAAATACTAT CACTTCTTCA ACCCTGTTGG TACGTGCGCA AGTTGCGGCT GTACCCGAGC CACCATTAGT TGCTATATTC GCATTAGGGT TGATGGGTTT AGTGTTACGT CGATTTAAGA AACAAGCTTA A
|
Protein sequence | MGNRSVRILQ RMKSSVWRII VKYNNSHLIK ENRMKFKSLK VGLATLSLSI GCLFNVANAG VITDTTDNSF IDQTTNLEWM DFGINNGQSY NYVASQLGSG GEYEGWSLPT SGQVYAMWAN AFLGLGSEVV DPNYYGTGQG RVDDRNAPLV SVLDPVMDAM GTNYRAASGD FSTGVFLGEN GYSAFRVYND RRSQWIDFSW LMDNGRLNIG GDTANTITSS TLLVRAQVAA VPEPPLVAIF ALGLMGLVLR RFKKQA
|
| |