Gene Ping_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1176 
Symbol 
ID4624474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1466045 
End bp1466413 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content38% 
IMG OID639796390 
Producthypothetical protein 
Protein accessionYP_942611 
Protein GI119944931 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.108145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGTTGC CTCGCCTACT ACAAGCGAGT AACTCAAAAG GGGTACTTGC AGAGAAACAA 
GCCTTATCTT ATTTACAAGA ACAAGGCTTA AGGTTAATTT GCCAAAATTA TTACTGCCGT
TTTGGTGAAA TAGATTTGAT TATGATCGAT CAAGATACCC TTGTTTTTAT TGAAGTGCGC
TATAGAAAAA ACAGTGATTT TGGCGGGCCG TTTGCTTCTA TTAATAAAAG CAAACAGCGT
AAAATAATCA CCACTGCGAA GCATTATTTG CGAACATTAG AAGATGAACC CTTTTGCCGC
TTTGATGCTA TTGCTATCGA CAGCAAATCA ACCACACCCG CTTGGATCCA AAATGCCTTT
CAAGAATAA
 
Protein sequence
MKLPRLLQAS NSKGVLAEKQ ALSYLQEQGL RLICQNYYCR FGEIDLIMID QDTLVFIEVR 
YRKNSDFGGP FASINKSKQR KIITTAKHYL RTLEDEPFCR FDAIAIDSKS TTPAWIQNAF
QE