| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1168 |
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| Symbol | |
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| ID | 4624557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1458139 |
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| End bp | 1459248 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639796382 |
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| Product | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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| Protein accession | YP_942603 |
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| Protein GI | 119944923 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.36118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.698015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCATC CTTCTTCAAT TGTACGTCGT GTATCAAAAC AGATCATGGT GGGTAATGTA
CCTGTTGGTG GAAATGCGCC AATTACAGTG CAATCTATGA CCAATACTTT GACCACGGAC
GTTGCTGCAA CAGTAGCACA AATCAAACGC TTAGAAGCGG TTGGTGCGGA TATGGTGCGC
GTTTCAGTGC CGACTATGAA TGCTGCGGAG GCTTTTCGAG AAATTAAAGC CTTAAGTAAT
ATCCCGCTGA TTGCCGATAT CCATTTTGAT TATCGTATCG CCCTGAAAGT CGCTGAATAT
GGCGTTGATT GTCTGCGCAT TAACCCGGGA AATATTGGTA ATGAGCGACG CATCCGCAGC
GTTGTTGATT GTGCGCGTGA TCATAATATT CCTATTCGAA TAGGGGTAAA TGGCGGCTCA
TTGGAAGCTG ATATTCAAGC AAAATATGGG GAGCCAACGG CACAAGCATT GGTTGATTCT
GCATTACGCC ATGTGGATAT TTTAGACCGG CTTAATTTTG ATCAATTTAA AGTGAGTGTA
AAAGCATCAG ATGCACAGCT GGCGGTTGAA TCATATCAAC TGCTTGCAAA ACAGATAAAC
CAACCTCTGC ATTTAGGGAT CACCGAAGCC GGTGGACTTC GCAGTGGCTC GGTTAAATCA
GCGGTTGGCT TAGGTATGTT ACTTTCCCAA GGCATAGGCG ATACCCTACG AGTATCCTTG
GCTGCAGATC CTGTAGAGGA AATTAAAGTG GGTTTTGATA TTTTAAAATC ATTACGTATT
CGCAGCCGTG GTATTAATTT TATTGCCTGT CCAACCTGTT CACGTCAAGA ATTTGATGTT
ATTGCGACGG TTAATGCTTT AGAGGAACGT CTTGAAGATA TTACTATGCC AATGGATGTC
TCGATTATTG GTTGTGTCGT CAATGGGCCG GGAGAAGCGT TAATGTCTGA TTTGGGCATT
ACTGGCGGTA GCAATAAAAG TGGTTTTTAC GAAGATGGGG TGCGTCAACG GGATCGTTTT
GATAATAATA ACGTGATTGA TCAGCTTGAA GCGAAAATTC GAGCCCGTGT CAGTCGTACG
GATCAGAGCA ATATCATCCT AAAAGTTTAA
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| Protein sequence | MSHPSSIVRR VSKQIMVGNV PVGGNAPITV QSMTNTLTTD VAATVAQIKR LEAVGADMVR
VSVPTMNAAE AFREIKALSN IPLIADIHFD YRIALKVAEY GVDCLRINPG NIGNERRIRS
VVDCARDHNI PIRIGVNGGS LEADIQAKYG EPTAQALVDS ALRHVDILDR LNFDQFKVSV
KASDAQLAVE SYQLLAKQIN QPLHLGITEA GGLRSGSVKS AVGLGMLLSQ GIGDTLRVSL
AADPVEEIKV GFDILKSLRI RSRGINFIAC PTCSRQEFDV IATVNALEER LEDITMPMDV
SIIGCVVNGP GEALMSDLGI TGGSNKSGFY EDGVRQRDRF DNNNVIDQLE AKIRARVSRT
DQSNIILKV
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