Gene Ping_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1165 
Symbol 
ID4624554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1454465 
End bp1455583 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content41% 
IMG OID639796379 
Productribosomal RNA large subunit methyltransferase N 
Protein accessionYP_942600 
Protein GI119944920 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.665651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.505082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATAA AAAAAGTAAA CCTACTGGAT TTGAACCGCG AAGGTTTACG TGCGTTTTTT 
GTCGAATTGG GCGAAAAACC CTTTCGTGCA GAGCAAGTGA TGAAATGGAT TTATCATTAT
GGCTGTGAAG ATTTTGATCT GATGAGTAAC GTTAATAAAA AACTGCGCCA AAAATTAAAA
GAATGCGCAG AAATTGTTGC ACCAGAGATT AAAGTCGAAC AACGCAGTAA TGATGGAACG
ATAAAATGGG CTATGACGGT AGGCGATCAA GAAGTTGAGA CTGTCTATAT TCCAGAAAAA
GATCGTGCGA CTTTGTGCAT TTCTTCACAG GTAGGTTGTG TATTAGCCTG TAATTTCTGC
TCTACTGCCC AGCAGGGATT CAACCGTAAT TTAAGCGTTA GCGAAATTAT TGGTCAAGTT
TGGCGTGCGG CTAAAATTGT CGGTGTAACA GGGGAAAGCG GTAAGCGGCC CATTACTAAT
GTGGTCATGA TGGGCATGGG AGAGCCGTTA CTTAACCTTA ATAATCTTAT TCCTGCCATG
GAATTGATGT TAGATGATTT TGGTTATGCA CTTTCAAAAC GCCGTGTCAC GGTATCAACA
TCAGGCGTTG TTCCTGCGCT TGATATTTTA GGCGATCGCA TTGATGTTTC TTTAGCTATT
TCATTGCATG CTGCCAACGA TACATTGCGC TCTCAAATGA TGCCCATTAA CGATAAGTAC
AATATTGCTG ATTTCTTAGC GGGTGTGAAA CGTTATATCG CAAAATCAAA GGCTAACCGT
GGTAAAGTAT ATATAGAGTA TTTACTGCTG GACCATTTTA ATGATTCGAC TGATCAAGCT
CATGAGTTGG CAATTTTACT TAAAGATACA CCTTGTAAGA TAAACCTGAT TCCTTTTAAC
CCCTTCCCGG GTAATGATTA CCAAAAACCA AGCAACAGCC GAGTGGATCG TTTTAATAAA
GTGTTAATGG AATATGGTTA TACCGTTACC GTCCGTAAAA CGCGCGGTGA TGATATTGAT
GCTGCATGCG GGCAACTTGT CGGAGATGTG ATTGATCGGA CTAAACGCAC CATGAAAAAA
CGCCTGCAGG GTGAAAACAT CGCGATTAGC GCGGGTTAA
 
Protein sequence
MNIKKVNLLD LNREGLRAFF VELGEKPFRA EQVMKWIYHY GCEDFDLMSN VNKKLRQKLK 
ECAEIVAPEI KVEQRSNDGT IKWAMTVGDQ EVETVYIPEK DRATLCISSQ VGCVLACNFC
STAQQGFNRN LSVSEIIGQV WRAAKIVGVT GESGKRPITN VVMMGMGEPL LNLNNLIPAM
ELMLDDFGYA LSKRRVTVST SGVVPALDIL GDRIDVSLAI SLHAANDTLR SQMMPINDKY
NIADFLAGVK RYIAKSKANR GKVYIEYLLL DHFNDSTDQA HELAILLKDT PCKINLIPFN
PFPGNDYQKP SNSRVDRFNK VLMEYGYTVT VRKTRGDDID AACGQLVGDV IDRTKRTMKK
RLQGENIAIS AG