Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1165 |
Symbol | |
ID | 4624554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1454465 |
End bp | 1455583 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639796379 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_942600 |
Protein GI | 119944920 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.665651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.505082 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATAA AAAAAGTAAA CCTACTGGAT TTGAACCGCG AAGGTTTACG TGCGTTTTTT GTCGAATTGG GCGAAAAACC CTTTCGTGCA GAGCAAGTGA TGAAATGGAT TTATCATTAT GGCTGTGAAG ATTTTGATCT GATGAGTAAC GTTAATAAAA AACTGCGCCA AAAATTAAAA GAATGCGCAG AAATTGTTGC ACCAGAGATT AAAGTCGAAC AACGCAGTAA TGATGGAACG ATAAAATGGG CTATGACGGT AGGCGATCAA GAAGTTGAGA CTGTCTATAT TCCAGAAAAA GATCGTGCGA CTTTGTGCAT TTCTTCACAG GTAGGTTGTG TATTAGCCTG TAATTTCTGC TCTACTGCCC AGCAGGGATT CAACCGTAAT TTAAGCGTTA GCGAAATTAT TGGTCAAGTT TGGCGTGCGG CTAAAATTGT CGGTGTAACA GGGGAAAGCG GTAAGCGGCC CATTACTAAT GTGGTCATGA TGGGCATGGG AGAGCCGTTA CTTAACCTTA ATAATCTTAT TCCTGCCATG GAATTGATGT TAGATGATTT TGGTTATGCA CTTTCAAAAC GCCGTGTCAC GGTATCAACA TCAGGCGTTG TTCCTGCGCT TGATATTTTA GGCGATCGCA TTGATGTTTC TTTAGCTATT TCATTGCATG CTGCCAACGA TACATTGCGC TCTCAAATGA TGCCCATTAA CGATAAGTAC AATATTGCTG ATTTCTTAGC GGGTGTGAAA CGTTATATCG CAAAATCAAA GGCTAACCGT GGTAAAGTAT ATATAGAGTA TTTACTGCTG GACCATTTTA ATGATTCGAC TGATCAAGCT CATGAGTTGG CAATTTTACT TAAAGATACA CCTTGTAAGA TAAACCTGAT TCCTTTTAAC CCCTTCCCGG GTAATGATTA CCAAAAACCA AGCAACAGCC GAGTGGATCG TTTTAATAAA GTGTTAATGG AATATGGTTA TACCGTTACC GTCCGTAAAA CGCGCGGTGA TGATATTGAT GCTGCATGCG GGCAACTTGT CGGAGATGTG ATTGATCGGA CTAAACGCAC CATGAAAAAA CGCCTGCAGG GTGAAAACAT CGCGATTAGC GCGGGTTAA
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Protein sequence | MNIKKVNLLD LNREGLRAFF VELGEKPFRA EQVMKWIYHY GCEDFDLMSN VNKKLRQKLK ECAEIVAPEI KVEQRSNDGT IKWAMTVGDQ EVETVYIPEK DRATLCISSQ VGCVLACNFC STAQQGFNRN LSVSEIIGQV WRAAKIVGVT GESGKRPITN VVMMGMGEPL LNLNNLIPAM ELMLDDFGYA LSKRRVTVST SGVVPALDIL GDRIDVSLAI SLHAANDTLR SQMMPINDKY NIADFLAGVK RYIAKSKANR GKVYIEYLLL DHFNDSTDQA HELAILLKDT PCKINLIPFN PFPGNDYQKP SNSRVDRFNK VLMEYGYTVT VRKTRGDDID AACGQLVGDV IDRTKRTMKK RLQGENIAIS AG
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