Gene Ping_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1163 
Symbol 
ID4624552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1452467 
End bp1452793 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content40% 
IMG OID639796377 
Producttranslation initiation factor SUI1 
Protein accessionYP_942598 
Protein GI119944918 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0953729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.11202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTCA GCGACCTTAA TCTTGTTTAT TCGACCGATG GTGGCAAGAT TGATAATCCA 
AAAATTGAAA AAAAAGCAGC TAAAGGTGAT GGTATTGTTC GCCTTCATCG TGAAACTAAA
GGGCGCAAGG GCAAAGGAGT AACTTTAATA AAAGGGCTAG AATTGGATGA AAAAGCATTA
AAAGCACTTG CCAAAGAGAT AAAGAAACGC ACCGGAACGG GGGGGAGTGT CAAAGATTTC
GTGATAGAGA TTCAGGGCGA CCAACGGGAA ATTATTCAAC TTCTTTTAGA GCAAAAAAAT
TACAAGGTAA AATTAGCCGG CAGTTGA
 
Protein sequence
MDFSDLNLVY STDGGKIDNP KIEKKAAKGD GIVRLHRETK GRKGKGVTLI KGLELDEKAL 
KALAKEIKKR TGTGGSVKDF VIEIQGDQRE IIQLLLEQKN YKVKLAGS